DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pgi and gpi

DIOPT Version :9

Sequence 1:NP_523663.1 Gene:Pgi / 35886 FlyBaseID:FBgn0003074 Length:558 Species:Drosophila melanogaster
Sequence 2:NP_001011010.1 Gene:gpi / 496419 XenbaseID:XB-GENE-944058 Length:553 Species:Xenopus tropicalis


Alignment Length:548 Identity:370/548 - (67%)
Similarity:438/548 - (79%) Gaps:2/548 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LNQEAAFQKLQEYYDSKGKDLNIKDLFVKDSKRFSKYSLRLHTQNDGEILLDYSKNRINDEVWDL 72
            |:.:..:|||.::|::....||::.:|..|..||||:|..|.|.: |:||||||||.||::|..|
 Frog     3 LSCDPVYQKLSQWYEAHHAGLNMRQMFEADKGRFSKFSKTLVTDH-GDILLDYSKNLINEDVMKL 66

  Fly    73 LLTLAKVRRVNAARDAMFSGQHINITENRAVLHTALRNRGTDPVLVDDKDVMPDVRAELAHMKEF 137
            |:.||..|.|.:||..|||.:.||.||||||||.|||||...|.|::.|||||:|.|.|..||.|
 Frog    67 LIELAHSRGVESARQKMFSAEKINFTENRAVLHIALRNRSNTPTLLEGKDVMPEVNAVLEKMKAF 131

  Fly   138 TNMVISGVWRGCTGKQITDVVNIGIGGSDLGPLMVTEALKPYGK-GLHSHFVSNIDGTHLAEVLK 201
            ...|.||.|:|.|||.||||||||||||||||||||||||||.| |....|||||||||:|:.|.
 Frog   132 CQKVRSGDWKGYTGKAITDVVNIGIGGSDLGPLMVTEALKPYSKGGPRVWFVSNIDGTHIAKTLA 196

  Fly   202 KVNYETTLFIVASKTFTTQETITNATSAKTWLLEHSKEPESVAKHFVALSTNKEKVTEFGIDSTN 266
            ::|.||:|||:||||||||||||||.:||.|.|..:|:..:|||||||||||..||.:||||:.|
 Frog   197 ELNPETSLFIIASKTFTTQETITNAETAKEWFLNSAKDASAVAKHFVALSTNAPKVKDFGIDTAN 261

  Fly   267 MFGFWDWVGGRYSLWSAIGLSICLSIGFENFEQLLDGAHFMDNHFKTTPFEKNAPVILALLGVWY 331
            ||.|||||||||||||||||||.|.||::|||:||.|||:|||||..||.|.|.||:||:|||||
 Frog   262 MFEFWDWVGGRYSLWSAIGLSIALHIGYDNFEKLLAGAHWMDNHFYKTPLENNVPVLLAMLGVWY 326

  Fly   332 SNFFKAETHALLPYDQYLHRFAAYFQQGDMESNGKFVSKSGKPVKYSTGPIVWGEPGTNGQHAFY 396
            .||:..|||||||||||:|||||||||||||||||:::::|..|.|:|||:||||||||||||||
 Frog   327 INFYGCETHALLPYDQYMHRFAAYFQQGDMESNGKYITRTGARVNYNTGPVVWGEPGTNGQHAFY 391

  Fly   397 QLIHQGTRLIPCDFIAPAQTHNPIAGGKHHKILLSNFLAQTEALMAGKTVDEARTELSKAGLCGN 461
            ||||||||.|||||:.|.||.:||....|||||||||||||||||.||:.:||:.||..:||.|:
 Frog   392 QLIHQGTRRIPCDFLIPVQTQHPIRNNLHHKILLSNFLAQTEALMKGKSTEEAKKELQASGLTGD 456

  Fly   462 ELDNLLPHKVFVGNRPTNSIVVKKVSPFTLGALIALYEHKIFVQGIIWDINSFDQWGVELGKQLA 526
            .|:.|||||||.|||||||||..|::||.:|||||:|||||||||::|||||:||||||||||||
 Frog   457 ALEKLLPHKVFEGNRPTNSIVFTKLNPFIMGALIAMYEHKIFVQGVVWDINSYDQWGVELGKQLA 521

  Fly   527 KAIEPELDHCNEVSTHDSSTNGLINFIK 554
            |.|||||:....:::|||||||||.|||
 Frog   522 KKIEPELETDAAITSHDSSTNGLIEFIK 549

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PgiNP_523663.1 pgi 7..556 CDD:234679 370/548 (68%)
SIS_PGI_1 128..290 CDD:240146 116/162 (72%)
SIS_PGI_2 338..529 CDD:240147 144/190 (76%)
gpiNP_001011010.1 pgi 1..553 CDD:234679 370/548 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 672 1.000 Domainoid score I143
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H145
Inparanoid 1 1.050 708 1.000 Inparanoid score I644
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D181898at33208
OrthoFinder 1 1.000 - - FOG0003701
OrthoInspector 1 1.000 - - oto103863
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R466
SonicParanoid 1 1.000 - - X2569
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.090

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