DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30349 and AT5G11240

DIOPT Version :9

Sequence 1:NP_610421.1 Gene:CG30349 / 35885 FlyBaseID:FBgn0050349 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_196685.2 Gene:AT5G11240 / 830994 AraportID:AT5G11240 Length:615 Species:Arabidopsis thaliana


Alignment Length:691 Identity:165/691 - (23%)
Similarity:274/691 - (39%) Gaps:162/691 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KHVL-GFSPNGGQLFASVDESGVLRIWNTETNTLYQEFT-------PNL-------QLSGSCTAL 55
            |.|| .|||....|..|..: |.::||:|....:..||.       .|:       .||...|.:
plant     7 KDVLTSFSPALDYLALSTGD-GRIKIWDTVKGQVQTEFADIASTEETNIYTKVGKGHLSVDYTCM 70

  Fly    56 TWVLVAGSRPKKSRKSLQAQDAAGDQLHIALGTYKGSVVIYSLAEGKISRTLSGDSHDGPVTSIT 120
            .|:    |..||.::.|      |..: :.|||..|.|:...:|.|::...:| |.|.|.|.:::
plant    71 KWL----SLEKKKKRKL------GTSV-LVLGTGGGDVLALDVASGQLKWRIS-DCHPGGVNAVS 123

  Fly   121 ND-NAGHLYTVGAD---CRVVVWSLTDERS---IAEWQVGPEKPQNIVYLQKSGTLAIGYRQLKV 178
            :. .|..:|:.|||   |::      |..|   |.:::...:...::........|.....|||.
plant   124 SSAKASCIYSGGADGMVCQI------DPHSGNLIRKFKASTKTVSSLCVSPDGKILVTASTQLKT 182

  Fly   179 YDIKTKELVETFTGHSGEINTISSVASTDGTEFVLTTAKMERVICFWKIDKKGKNKASACTLLME 243
            ::....:.::.||||.|   .:..||.|:..::||::|..||.|..||.|...|..|| |.|.:|
plant   183 FNCSDLKKIQKFTGHPG---VVRCVAFTEDGKYVLSSAVGERYIAVWKTDGAKKQSAS-CVLALE 243

  Fly   244 DLAYCLTS--EVRDDGQLRVASVTRNGIIHI-YLLNVNSL-----------SAEKFVKP-KVSLQ 293
            .....:.|  |..:.| |.|.:::..|:.:. |..||..|           :|:..:|| |.||.
plant   244 HPPVFVDSWGETNEKG-LYVLAISEIGVCYFWYGSNVEELCNATPTKVALATADSSLKPYKSSLP 307

  Fly   294 IVSDGAETVEPLLAVAAHFVTDSNRSHEILFGYGSRQQLQFERFTPNYGEKLNVIVRADPKKLYA 358
            ::          .|.....:.....:|..: ..|...:..|::....:|..|         .|.|
plant   308 LI----------FAAKLQGILKPGSAHAFI-ASGLLVKPSFQKMVLQFGNDL---------VLNA 352

  Fly   359 KKKGKEQPGYQAATK------VQKPIVNQKNVEYNSA-LPIS-------QKKVQ----------- 398
            .|.|...|..|:.:|      ||..:..........| |||:       :|.||           
plant   353 SKDGILLPITQSVSKSSKRQGVQNKVTTLDRAHAEDALLPIARVADLHEKKSVQLHSSDKDTYMV 417

  Fly   399 --------NEVPMEARLEHLKIQG-----TKLSGGKLL--TQSKTQLLMQALHSKDQAMIQAVLS 448
                    ....||.:|..|.|.|     ..||...::  |..|..|..:.|.|       ||||
plant   418 DQSHADHVETFSMEDKLRSLGILGGTDEHKNLSYASIIDGTDLKAYLPPKKLKS-------AVLS 475

  Fly   449 TQDPETIQLTLDRLPLDYVNPLVNELSILLQGKHASVRSALRWLHALTSTHTSVLMSEDKEALRE 513
             .:|.|...||:            .|:.:.|.:....|..|.|::::...|:..:||::.:. ::
plant   476 -MEPSTAFKTLE------------ALAAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKN-QQ 526

  Fly   514 KLAVCLGVAEQRMHCLSEALQITGRVNLIINQMKRNADNHLNDNKALILDEDPDEPDPEAETNWS 578
            .|...:.:.:.|...|.:.||::||:.|:..|:.:.|.   :..:....|::.||.:.|.|    
plant   527 LLNTLVKITKSRGTALQQLLQLSGRLQLVTAQINKAAG---SQTQITAHDQEIDESEDEEE---- 584

  Fly   579 DLEEDQPGSPKSPLEDELVADDDLATDDGNADADTDSDVSM 619
            |:|:...|...:        :.||::|||.     |.|.|:
plant   585 DVEDHFYGENDN--------ESDLSSDDGK-----DKDDSL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30349NP_610421.1 WD40 <7..237 CDD:225201 67/251 (27%)
WD40 repeat 7..50 CDD:293791 15/57 (26%)
WD40 11..>230 CDD:295369 63/239 (26%)
WD40 repeat 72..108 CDD:293791 9/35 (26%)
WD40 repeat 117..151 CDD:293791 9/40 (23%)
WD40 repeat 159..191 CDD:293791 4/31 (13%)
WD40 repeat 200..241 CDD:293791 16/40 (40%)
WD40 repeat 248..273 CDD:293791 6/27 (22%)
Utp12 439..534 CDD:281932 19/94 (20%)
AT5G11240NP_196685.2 WD40 13..274 CDD:392136 75/284 (26%)
WD40 repeat 13..60 CDD:293791 12/47 (26%)
WD40 repeat 68..114 CDD:293791 15/57 (26%)
WD40 repeat 119..155 CDD:293791 10/41 (24%)
WD40 repeat 162..195 CDD:293791 4/32 (13%)
WD40 repeat 201..243 CDD:293791 17/42 (40%)
Utp12 465..557 CDD:367767 26/112 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4547
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38810
Inparanoid 1 1.050 88 1.000 Inparanoid score I2309
OMA 1 1.010 - - QHG55826
OrthoDB 1 1.010 - - D1032141at2759
OrthoFinder 1 1.000 - - FOG0002889
OrthoInspector 1 1.000 - - oto2969
orthoMCL 1 0.900 - - OOG6_102917
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X5756
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1211.740

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