DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30349 and AT5G11240

DIOPT Version :10

Sequence 1:NP_610421.1 Gene:CG30349 / 35885 FlyBaseID:FBgn0050349 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_196685.2 Gene:AT5G11240 / 830994 AraportID:AT5G11240 Length:615 Species:Arabidopsis thaliana


Alignment Length:691 Identity:165/691 - (23%)
Similarity:274/691 - (39%) Gaps:162/691 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 KHVL-GFSPNGGQLFASVDESGVLRIWNTETNTLYQEFT-------PNL-------QLSGSCTAL 55
            |.|| .|||....|..|..: |.::||:|....:..||.       .|:       .||...|.:
plant     7 KDVLTSFSPALDYLALSTGD-GRIKIWDTVKGQVQTEFADIASTEETNIYTKVGKGHLSVDYTCM 70

  Fly    56 TWVLVAGSRPKKSRKSLQAQDAAGDQLHIALGTYKGSVVIYSLAEGKISRTLSGDSHDGPVTSIT 120
            .|:    |..||.::.|      |..: :.|||..|.|:...:|.|::...:| |.|.|.|.:::
plant    71 KWL----SLEKKKKRKL------GTSV-LVLGTGGGDVLALDVASGQLKWRIS-DCHPGGVNAVS 123

  Fly   121 ND-NAGHLYTVGAD---CRVVVWSLTDERS---IAEWQVGPEKPQNIVYLQKSGTLAIGYRQLKV 178
            :. .|..:|:.|||   |::      |..|   |.:::...:...::........|.....|||.
plant   124 SSAKASCIYSGGADGMVCQI------DPHSGNLIRKFKASTKTVSSLCVSPDGKILVTASTQLKT 182

  Fly   179 YDIKTKELVETFTGHSGEINTISSVASTDGTEFVLTTAKMERVICFWKIDKKGKNKASACTLLME 243
            ::....:.::.||||.|   .:..||.|:..::||::|..||.|..||.|...|..|| |.|.:|
plant   183 FNCSDLKKIQKFTGHPG---VVRCVAFTEDGKYVLSSAVGERYIAVWKTDGAKKQSAS-CVLALE 243

  Fly   244 DLAYCLTS--EVRDDGQLRVASVTRNGIIHI-YLLNVNSL-----------SAEKFVKP-KVSLQ 293
            .....:.|  |..:.| |.|.:::..|:.:. |..||..|           :|:..:|| |.||.
plant   244 HPPVFVDSWGETNEKG-LYVLAISEIGVCYFWYGSNVEELCNATPTKVALATADSSLKPYKSSLP 307

  Fly   294 IVSDGAETVEPLLAVAAHFVTDSNRSHEILFGYGSRQQLQFERFTPNYGEKLNVIVRADPKKLYA 358
            ::          .|.....:.....:|..: ..|...:..|::....:|..|         .|.|
plant   308 LI----------FAAKLQGILKPGSAHAFI-ASGLLVKPSFQKMVLQFGNDL---------VLNA 352

  Fly   359 KKKGKEQPGYQAATK------VQKPIVNQKNVEYNSA-LPIS-------QKKVQ----------- 398
            .|.|...|..|:.:|      ||..:..........| |||:       :|.||           
plant   353 SKDGILLPITQSVSKSSKRQGVQNKVTTLDRAHAEDALLPIARVADLHEKKSVQLHSSDKDTYMV 417

  Fly   399 --------NEVPMEARLEHLKIQG-----TKLSGGKLL--TQSKTQLLMQALHSKDQAMIQAVLS 448
                    ....||.:|..|.|.|     ..||...::  |..|..|..:.|.|       ||||
plant   418 DQSHADHVETFSMEDKLRSLGILGGTDEHKNLSYASIIDGTDLKAYLPPKKLKS-------AVLS 475

  Fly   449 TQDPETIQLTLDRLPLDYVNPLVNELSILLQGKHASVRSALRWLHALTSTHTSVLMSEDKEALRE 513
             .:|.|...||:            .|:.:.|.:....|..|.|::::...|:..:||::.:. ::
plant   476 -MEPSTAFKTLE------------ALAAMWQTRACGGRHLLPWIYSIMVNHSHYIMSQEPKN-QQ 526

  Fly   514 KLAVCLGVAEQRMHCLSEALQITGRVNLIINQMKRNADNHLNDNKALILDEDPDEPDPEAETNWS 578
            .|...:.:.:.|...|.:.||::||:.|:..|:.:.|.   :..:....|::.||.:.|.|    
plant   527 LLNTLVKITKSRGTALQQLLQLSGRLQLVTAQINKAAG---SQTQITAHDQEIDESEDEEE---- 584

  Fly   579 DLEEDQPGSPKSPLEDELVADDDLATDDGNADADTDSDVSM 619
            |:|:...|...:        :.||::|||.     |.|.|:
plant   585 DVEDHFYGENDN--------ESDLSSDDGK-----DKDDSL 612

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30349NP_610421.1 WD40 repeat 7..50 CDD:293791 15/57 (26%)
WD40 <11..228 CDD:441893 62/237 (26%)
WD40 repeat 72..108 CDD:293791 9/35 (26%)
WD40 repeat 117..151 CDD:293791 9/40 (23%)
WD40 repeat 159..191 CDD:293791 4/31 (13%)
WD40 repeat 200..241 CDD:293791 16/40 (40%)
WD40 repeat 248..273 CDD:293791 6/27 (22%)
Utp12 439..544 CDD:461125 24/104 (23%)
AT5G11240NP_196685.2 WD40 <12..230 CDD:441893 62/239 (26%)
WD40 repeat 13..60 CDD:293791 12/47 (26%)
WD40 repeat 68..114 CDD:293791 15/57 (26%)
WD40 repeat 119..155 CDD:293791 10/41 (24%)
WD40 repeat 162..195 CDD:293791 4/32 (13%)
WD40 repeat 201..243 CDD:293791 17/42 (40%)
Utp12 465..557 CDD:461125 26/112 (23%)

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