DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30349 and wdr43

DIOPT Version :9

Sequence 1:NP_610421.1 Gene:CG30349 / 35885 FlyBaseID:FBgn0050349 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_001018176.1 Gene:wdr43 / 317637 ZFINID:ZDB-GENE-021231-3 Length:650 Species:Danio rerio


Alignment Length:660 Identity:181/660 - (27%)
Similarity:303/660 - (45%) Gaps:85/660 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 FSPNGGQLFASVDESGVLRIWNTETNTLYQEFTPNLQLSGSCTALTW--VLVAGSRPKKSRKSLQ 73
            |||...|..|...:.|.|||||||:.||.||:.|:..||.:||.:||  .......|::.|:...
Zfish    14 FSPKSHQFLALCAQDGRLRIWNTESKTLQQEYVPSAHLSAACTCVTWGPCRAVQEVPQRKRRKCD 78

  Fly    74 AQDAAGDQLHIALGTYKGSVVIYSLAEGKISRTLSGDSHDGPVTSI---TNDNAGHLYTVGADCR 135
            |..:|.....:||||..|:::|||..:|.:..||.| .|.|||.|:   ..|:.  ||:...|..
Zfish    79 AASSAEQSDLLALGTAAGTILIYSTLKGDLHCTLDG-GHSGPVNSVQWHPEDSV--LYSGSDDTH 140

  Fly   136 VVVWSLTDERSIAEWQVGPEKPQNIVYLQKSGTLAIGYRQLKVYDIKTKELVETFTGHSGEINTI 200
            :..|.|...:...:|:.......::........|......:|::|::|||:...|||||..:.|:
Zfish   141 IAEWDLKTGKVCCKWKADRSAISSLCISPDGKMLLSAGMTIKMWDLETKEVYRKFTGHSTMVTTL 205

  Fly   201 SSVAS----TDGTEFVLTTAKMERVICFWKIDKKGKNKASACTLLMEDLAYCL---TSEVRDDGQ 258
            ....:    ::|..| |:.|..:|::..|::...||:|.|..:..:.|....:   ||..:|:. 
Zfish   206 CFATTRPPDSNGMYF-LSGAVHDRLLSVWQVRSDGKDKNSVVSFTLTDEPQHIDLQTSNSKDEA- 268

  Fly   259 LRVASVTRNGIIHIYLLNVNSLSAEKFVKPKVSLQIVSDGAETVEPLLAVAAHFVTDSNRSHEIL 323
            :|:|.|.::|.:|::...:|. ..:|.:.|..|||:.:...|:..|:..:||....|   ...::
Zfish   269 VRLAVVCKDGQLHLFEHFLNG-QCKKPLSPACSLQVSTMKGESPVPVPLLAAALCAD---RQNLM 329

  Fly   324 FGYGSRQQLQFERFTPNYGEK---LNVIVRA------DPKKLYAKKKGKEQPGYQAATKVQKPIV 379
            ..||...|...|:...|..|:   ||..|.|      |                ...:||:.|:|
Zfish   330 LAYGHHLQPVMEKTPFNTSERHTCLNRDVHATLSLSVD----------------TTVSKVKTPVV 378

  Fly   380 NQKNVEYNSALPISQKKVQ---------------NEVPMEARLEHLKI----QGTKLSGGKLLTQ 425
            ||::......:|..:..::               .||.:|.|||.:::    :|.......|.|.
Zfish   379 NQQSKVLIPGVPGHKAPIKLTPNEGEKRKKGASTTEVSIEERLEQIELSAGRKGADKGSSSLQTD 443

  Fly   426 SKTQLLMQALHSKDQAMIQAVLSTQDPETIQLTLDRLPLDYVNPLVNELSILLQGKHASVRSALR 490
            |...||:|.|.|||:.::..:..|:....|:.|:.|||...|.||:.|||..|||...:....:.
Zfish   444 SFAVLLVQGLESKDEKILNKIFQTKKETLIKNTVARLPPPAVLPLLEELSRRLQGHPYAALLIVH 508

  Fly   491 WLHALTSTHTSVLMSEDKEALREKLAVCLGVAEQRMHCLSEALQITGRVNLIINQM-KRNADNHL 554
            |..|:.:.|||.|.|  ...|..:|.....:.|.|:....:..::.|::.|::.|: ..|:...:
Zfish   509 WFKAVLTQHTSYLSS--LPDLVSQLGSIYQMIESRVKLYHQITRLHGKLYLLMTQVATSNSATKV 571

  Fly   555 N--DNKALIL-------DEDP-DEPDPEAET-NWSDLEE--DQPGSPKSPLEDELVADDDLATDD 606
            .  |:.|.::       |||. ||..||.:: ||.:.||  :..|..|:..::|   |.|: .::
Zfish   572 GEIDHTAKLVYEEESSEDEDSGDEGRPEDDSDNWEEDEEAMEVTGDKKNHKDEE---DQDM-NEE 632

  Fly   607 GNADADTDSD 616
            ..|:.|:|.|
Zfish   633 SKANGDSDLD 642

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30349NP_610421.1 WD40 <7..237 CDD:225201 73/234 (31%)
WD40 repeat 7..50 CDD:293791 19/38 (50%)
WD40 11..>230 CDD:295369 70/227 (31%)
WD40 repeat 72..108 CDD:293791 12/35 (34%)
WD40 repeat 117..151 CDD:293791 7/36 (19%)
WD40 repeat 159..191 CDD:293791 6/31 (19%)
WD40 repeat 200..241 CDD:293791 10/44 (23%)
WD40 repeat 248..273 CDD:293791 8/27 (30%)
Utp12 439..534 CDD:281932 27/94 (29%)
wdr43NP_001018176.1 WD40 12..271 CDD:295369 78/261 (30%)
WD40 <12..271 CDD:225201 78/261 (30%)
WD40 repeat 12..49 CDD:293791 18/34 (53%)
WD40 repeat 56..115 CDD:293791 19/59 (32%)
WD40 repeat 120..156 CDD:293791 8/37 (22%)
WD40 repeat 163..196 CDD:293791 6/32 (19%)
WD40 repeat 202..249 CDD:293791 11/47 (23%)
Utp12 457..558 CDD:281932 28/102 (27%)
Paf1 <598..650 CDD:281915 15/49 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4547
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38810
Inparanoid 1 1.050 207 1.000 Inparanoid score I3680
OMA 1 1.010 - - QHG55826
OrthoDB 1 1.010 - - D1032141at2759
OrthoFinder 1 1.000 - - FOG0002889
OrthoInspector 1 1.000 - - oto39734
orthoMCL 1 0.900 - - OOG6_102917
Panther 1 1.100 - - LDO PTHR44267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1622
SonicParanoid 1 1.000 - - X5756
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.870

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