DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG30349 and utp5

DIOPT Version :9

Sequence 1:NP_610421.1 Gene:CG30349 / 35885 FlyBaseID:FBgn0050349 Length:620 Species:Drosophila melanogaster
Sequence 2:NP_593621.2 Gene:utp5 / 2543388 PomBaseID:SPAC20H4.01 Length:666 Species:Schizosaccharomyces pombe


Alignment Length:684 Identity:153/684 - (22%)
Similarity:278/684 - (40%) Gaps:135/684 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 QLFASVDE---SGVLRIWNTETNTLYQEFTPNLQLSGSCTALTWVLVAGSRPKKSRKSLQAQ--- 75
            :|:|:|.|   :..|||:::...:|..|:....:...||.|  |          .:|.|.|.   
pombe    29 KLYANVVEALDAQRLRIFDSVAGSLKTEYILEKEKVISCIA--W----------EQKPLYASEQI 81

  Fly    76 --DAAGDQLHIALGTYKGSVVIYSLAEGKISRTLSGD-----------SHDGPVTSITND----- 122
              |.:|....:.|||..|.::|||...|.::||.|..           ::||....||..     
pombe    82 TTDISGSGEILVLGTNSGEILIYSEHLGSLTRTYSFGILQKIIGAHVLANDGFAIDITGKVVCFS 146

  Fly   123 -NAGHLYTVGADCRVVVWSLTDERSIAEWQVGPEKPQNIVYLQ---KSGTLAIGYRQLKVYDIKT 183
             |.|.:.|          |.|...|..|:        :.:||.   |:..||..: .:.:.|:..
pombe   147 VNTGEVRT----------SFTVPSSSREF--------SGLYLSTVFKNLALASSH-NIHIVDLNH 192

  Fly   184 KELVETFTGHSGEINTISSVASTDGTEFVL-TTAKMERVICFW--KIDKKG-------KN-KASA 237
            :..:::.|.|:..||::......|..:|.. .:|..:|.|..:  ::|..|       || .|..
pombe   193 RNPIDSLTTHTSMINSVVFQYLKDENKFYFGVSANQDRFINLYSKELDGTGEFPTNTVKNVGALV 257

  Fly   238 CTLLMEDLAYCLTSEVRDDGQLRVASVTRNGIIHIYL-----------LNVNSLS-AEKFVKPKV 290
            |...::.|:.....|..:.|.|  |::|.:|.|.::.           .|.:||| ..|.:....
pombe   258 CENEVKMLSIAYEIENPETGVL--AALTNDGTIEMFENPWLSKLRQNGTNASSLSHRRKLLTSHS 320

  Fly   291 SLQIVSDGAETVEPLLAVAAHFVTDSNRSHEILFGYGSRQQLQFERFTPNYGEKLNVIVRADPKK 355
            :|:|....:....|::..:..|  :|..|..:::...:|...:...:.....:..|.::.....|
pombe   321 TLKICFCRSRGDPPIVLESIAF--ESTDSLTVVWKESTRTVFETVPWRILSSQATNGLIELVRSK 383

  Fly   356 LYAKKKGK-------EQPGYQAATKVQKPIVNQKNVEYNSALPISQKKVQNEVPMEARLEHLKIQ 413
            .....|.|       |.....::..:||.:  :|..|..||..:..:  :.|..:..||::|   
pombe   384 TRLTSKNKTVSNVYDESNATISSGVMQKDL--RKTEEIGSAEAMEGE--EQEPSLAERLQNL--- 441

  Fly   414 GTKL--SGGKLLTQ-----SKTQLLMQALHSKDQAMIQAVLSTQDPETIQLTLDRLPLDYVNPLV 471
             |||  ....|.||     |.:.:|.|||.:.||:::::..:..:.|||..|:.||.......|:
pombe   442 -TKLDQQAQALSTQISASTSLSTVLTQALKTNDQSLLESCFNNNNVETIDTTIRRLDPSLAPILL 505

  Fly   472 NELS--ILLQGKHASVRSALRWLHALTSTHTSVLMSEDKEALREKLAVCLGVAEQRMHCLSEALQ 534
            ::|:  :.|:...|.|  .:.|:.....||...|:..|.  |:.|||....:.|.|....|..|.
pombe   506 DKLAEKLALRPMRADV--LMVWIRCTLITHGGHLVLVDD--LKHKLANLHSILEDRASKYSSMLA 566

  Fly   535 ITGRVNLIINQMKRNADNHLNDNKALILDEDP--------DEPDPEAETNWSDLEEDQPGSPKSP 591
            :.|:::|:::|:.........||..   ||:|        :|...||.:.     .|:..|....
pombe   567 LQGKLDLVLSQIAFRKAGGSKDNAE---DEEPISIYYEGYEESMDEASST-----GDEGYSSDDS 623

  Fly   592 LEDELVADDDLAT-----DDGNADADTDSDVSMD 620
            :::|:.:|::.::     |:.|.:.:...|.|.|
pombe   624 VDNEMYSDEENSSKGAFPDEENENRELSEDYSGD 657

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG30349NP_610421.1 WD40 <7..237 CDD:225201 60/258 (23%)
WD40 repeat 7..50 CDD:293791 9/35 (26%)
WD40 11..>230 CDD:295369 56/243 (23%)
WD40 repeat 72..108 CDD:293791 14/40 (35%)
WD40 repeat 117..151 CDD:293791 9/39 (23%)
WD40 repeat 159..191 CDD:293791 6/34 (18%)
WD40 repeat 200..241 CDD:293791 11/51 (22%)
WD40 repeat 248..273 CDD:293791 7/24 (29%)
Utp12 439..534 CDD:281932 25/96 (26%)
utp5NP_593621.2 PQQ <70..>162 CDD:224437 26/111 (23%)
WD40 <86..291 CDD:295369 52/225 (23%)
LRS4 <383..516 CDD:255978 36/140 (26%)
Utp12 473..574 CDD:281932 27/104 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4547
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H38810
Inparanoid 1 1.050 69 1.000 Inparanoid score I1936
OMA 1 1.010 - - QHG55826
OrthoFinder 1 1.000 - - FOG0002889
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_102917
Panther 1 1.100 - - LDO PTHR44267
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1622
SonicParanoid 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1110.860

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