DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and cct8

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001007875.1 Gene:cct8 / 493260 XenbaseID:XB-GENE-974316 Length:554 Species:Xenopus tropicalis


Alignment Length:545 Identity:339/545 - (62%)
Similarity:435/545 - (79%) Gaps:1/545 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALSVPKAPGVSQMLKDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFV 65
            |||.||||||.:||||:||:.||||||||||||.||||.|||.|:||||||||||:|||:||.||
 Frog     1 MALHVPKAPGFAQMLKEGAKHYSGLEEAVFRNIQACKELAQTTRTAYGPNGMNKMVINHLEKLFV 65

  Fly    66 TSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISD 130
            |:||.||:|||:|:|||||::||||.||:.|||||||||:|.||||||.||||||:|::.:|:.:
 Frog    66 TNDAATIIRELEVQHPAAKMVVMASHMQEQEVGDGTNFVLVFAGALLELAEELLRMGLSVSEVIE 130

  Fly   131 GYEKALEKALEILPNLVSHKIEDYRNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKACVSILPDEG 195
            |||||.:|||||||:||....::.|::::|..:|:|||||||||.|.||:.|:::|||||||:.|
 Frog   131 GYEKACKKALEILPDLVCSSAKNLRDIDEVASLLQTSIMSKQYGNELFLSKLIAQACVSILPESG 195

  Fly   196 TFNVDNIRICKILGSGLTKSEVVRGMVFKRFVEGDVTYAEKAKIVIFSCPVDIIQTETKGTVLIK 260
            .|||||||:|||||||:..|.|:.|||||:..||:::..:.|:|.|:|||.|.:.|||||||||.
 Frog   196 HFNVDNIRVCKILGSGICASSVLHGMVFKKEAEGNISSVKDARIAIYSCPFDGMITETKGTVLIN 260

  Fly   261 SADELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRRLS 325
            ||.||::||.|||:|:|.|:||||:||..|:|.||||.|||||:.|||.||.||||||:|||||.
 Frog   261 SAQELMNFSKGEENLMEEQVKAIAEAGATVLVTGGKVADMALHYANKYNLMVVRLNSKWDLRRLC 325

  Fly   326 RSVNATVLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIER 390
            ::|..|.|||:|.|:.||:|.||.|.:.|:|||.:|.|:::.:|..||||||||:|||.|||:||
 Frog   326 KTVCGTALPRLTPPTAEEMGRCDSVYLSEVGDTQVVVFKHDKEDGAIATVVIRGSTDNLMDDVER 390

  Fly   391 ALDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAEN 455
            |:|||:|.||.||||.|.:||.||||:|||.|:::|.:|.|||||||::|||.|.|..|:|||||
 Frog   391 AVDDAVNTFKILTRDKRLVPGGGATEVELAKQITSYGETCPGLDQYAIKKFAEAFESIPRALAEN 455

  Fly   456 SGINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATIL 520
            ||:...||:::||..| .|..|.:|||||||.|:..|..::.:.|.|..|:||:|.|..||.|:|
 Frog   456 SGVKANEIISKLYAMH-QEGNKNVGFDIEAESAAVKDMMESNILDTYLGKYWGIKLATNAAITVL 519

  Fly   521 KVDQIIMAKRAGGPKVRQAAGSDDE 545
            :||||||||.||||:..:..|..|:
 Frog   520 RVDQIIMAKAAGGPRAPKQQGHWDK 544

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 316/508 (62%)
Cpn60_TCP1 40..529 CDD:278544 300/488 (61%)
cct8NP_001007875.1 chap_CCT_theta 10..539 CDD:274087 329/529 (62%)
Cpn60_TCP1 39..528 CDD:278544 300/489 (61%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 626 1.000 Domainoid score I175
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H4802
Inparanoid 1 1.050 698 1.000 Inparanoid score I661
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 1 1.000 - - FOG0004632
OrthoInspector 1 1.000 - - oto104203
Panther 1 1.100 - - LDO PTHR11353
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1490
SonicParanoid 1 1.000 - - X3246
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.190

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