DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and Hsp60B

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_524925.1 Gene:Hsp60B / 48572 FlyBaseID:FBgn0011244 Length:648 Species:Drosophila melanogaster


Alignment Length:648 Identity:131/648 - (20%)
Similarity:229/648 - (35%) Gaps:199/648 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 VPKAPGVSQMLKDGARMY-------SGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEK 62
            ||||...|:..   ||||       ||:...:.|.:..   .|..:....||.|.:.::......
  Fly     6 VPKAITSSRCF---ARMYSKDVRFGSGVRAMMIRGVDI---LADAVAVTMGPKGRSVIVERPWTS 64

  Fly    63 QFVTSDAGTIMRELDVE----HPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGI 123
            ..:|.|..|:.|.:.::    :..|||:...:...:...||||....|||.|:.:.....:.:|.
  Fly    65 PKITKDGFTVARSIALKDQHMNLGAKLVQDVADNTNESAGDGTTTATVLARAIAKEGFNQITMGA 129

  Fly   124 TTAEISDGYEKALEKALEILPNLVSHKIEDY-RNVEKVKEVLRTSIMSKQYGQEDFLNDLVSKAC 187
            ...||..|...|::        :|..|:::. :.||..:|:.:.:.:|.....|  :..|:.:|.
  Fly   130 NPVEIRRGVMLAVD--------VVKDKLKEMSKAVETREEIQQVATLSANGDTE--IGRLIGEAT 184

  Fly   188 VSILPDEGTFNV------------------DN------------------------IRICKILGS 210
            ..:.| .||..|                  ||                        |.:.||.| 
  Fly   185 DKVGP-RGTITVKDGKRLKDELNIIQGLRFDNGYVSPFFVNSSKGSKVEFANALVMISLKKITG- 247

  Fly   211 GLTKSEVVRGM-----------VFKRFVEGDVTYA---EKAKIVIFSCPVDI------------- 248
               .|::|:|:           :....:.|:...|   .|.::.:..|.|..             
  Fly   248 ---LSQIVKGLEQSLRQRRPLIIIAEDISGEALNALVLNKLRLGLQVCAVKSPSYGHHRKELIGD 309

  Fly   249 IQTETKGTVLIKSADELLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAV 313
            |...|..|:.   .|: :::|..||:.||.    :...|..|:   .|...|.|....|.||:.:
  Fly   310 ISAATGATIF---GDD-INYSKMEEAKLED----LGQVGEAVI---SKDSTMLLQGKPKTGLLEM 363

  Fly   314 RLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIR 378
            |:..                      .|:||  .:|....|..|.  :..|.......:|.:.|.
  Fly   364 RIQQ----------------------IQDEL--AEKQIKPEQRDR--LRQRLSALTKGVAVLHIG 402

  Fly   379 GATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEI-------ELATQLSAYADTLPGLDQY 436
            |.::..:::.:..:.||:|..:....:| .:||.|...:       ||.|:   .||...|:|  
  Fly   403 GGSEVEVNEKKDRVVDALNATRAAIEEG-IVPGGGTAFLRCIPYLQELKTE---SADLQKGVD-- 461

  Fly   437 AVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIEAE------KASTIDTTK 495
               ...|||.:..:.:|:|:|::|..:|.::.     ...:..|:|...:      :...||.||
  Fly   462 ---IVCNALRMPCQTIAQNAGVDGPMVVAKVL-----NGSEDYGYDAMGDEYCRLVEKGIIDPTK 518

  Fly   496 AKLFDLYQSKFWGLKYAV----GAAATILKVDQIIMAKR----------AGGPKVRQAAGSDD 544
            .            |:.|:    |.|:.:...:.:|...|          |||       |.||
  Fly   519 V------------LRTAITDAAGVASLLSTTEVVITDSRNDDLLSKLSGAGG-------GMDD 562

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 118/606 (19%)
Cpn60_TCP1 40..529 CDD:278544 112/579 (19%)
Hsp60BNP_524925.1 PTZ00114 9..558 CDD:185455 123/632 (19%)
GroEL 22..543 CDD:239460 115/601 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453433
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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