DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT8 and Cct6b

DIOPT Version :10

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_001014250.1 Gene:Cct6b / 363658 RGDID:1359453 Length:531 Species:Rattus norvegicus


Alignment Length:532 Identity:135/532 - (25%)
Similarity:250/532 - (46%) Gaps:36/532 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKLIVMAS 90
            :.|:..||.|.:.....:|.:.||.|..||:::......:|.|...::.|:.::||.|.:|...:
  Rat    17 QAALAVNICAARGLQDVLRPSLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVA 81

  Fly    91 QMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLVSHKIEDYR 155
            ..||...||||...|::.|.||:.|:..:..|:....|::|::.|..||||:|..:   |::...
  Rat    82 AAQDHITGDGTTSNVLIIGELLKQADLYISEGLHPRIIAEGFDVAKTKALEVLDKI---KVQKEM 143

  Fly   156 NVEKVKEVLRTSIMSKQYGQ-EDFLNDLVSKACVSILPDEGTFNVDNIRICKILGSGLTKSEVVR 219
            ..|.:.:|.|||:.:|.:.: .|.|.:.|..:.::|.......::..:.|.::.....|.:::||
  Rat   144 KREMLLDVARTSLRTKVHTELADILTEAVVDSVLAIRRPGIPIDLFMVEIVEMRHKSETDTQLVR 208

  Fly   220 GMV---------FKRFVEGDVTYAEKAKIVIFSCPVDIIQTETKGTVLIKSADELLSFSSGEESL 275
            |:|         .|:.|       :.|.|:|.:..::..:||.......|:.:|.......|...
  Rat   209 GLVLDHGARHPRMKKQV-------QDAYILICNVSLEYEKTEVSSGFFYKTVEEKEKLVKAERKF 266

  Fly   276 LESQIKAIADAGVKVVVAGGK---------VGDMALHFLNKYGLMAVRLNSKFDLRRLSRSVNAT 331
            :|.:::.|.|...||.....|         :..::|..|.|:.::|:|...:.:|.||:.:....
  Rat   267 IEDRVQKIIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRNLERLTLACGGL 331

  Fly   332 VLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAI 396
            .:..:...|:|.||:...|....||:... .|..:..:....|::::|...:.:..|:.||.|.:
  Rat   332 AVNSLEDLSEECLGHAGLVFEYTLGEEKF-TFIEDCVNPLSVTLLVKGPNKHTLIQIKDALRDGL 395

  Fly   397 NNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGT 461
            ...|....||..:|||||.|:.:|..|..|...:.|..:..::.||:||.:.||.||:|||.:..
  Rat   396 RAVKNAIEDGCVVPGAGAVEVAIAEALVNYKHCVQGRARLGIQAFADALLIIPKVLAQNSGYDLQ 460

  Fly   462 EIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQII 526
            |.:.::...| .|:.:.:|.|:..  ...:...:|.::|.|..|...|......|..:|.||:|:
  Rat   461 ETLIKIQTKH-AESKELVGIDLNT--GEPMVAAEAGIWDNYCVKKHILHSCTVIATNVLLVDEIM 522

  Fly   527 MAKRAGGPKVRQ 538
               |||...:|:
  Rat   523 ---RAGMSSLRE 531

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 131/521 (25%)
Cct6bNP_001014250.1 chap_CCT_zeta 3..530 CDD:274088 134/529 (25%)

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