DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and CCT5

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_523707.1 Gene:CCT5 / 36308 FlyBaseID:FBgn0010621 Length:542 Species:Drosophila melanogaster


Alignment Length:521 Identity:152/521 - (29%)
Similarity:268/521 - (51%) Gaps:26/521 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 EAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQ 91
            :|:..:|.|.::.|.|::::.||.|::|::::......||:|..|||:.::|:|..|||:|..||
  Fly    33 DAIKTHIMAARQIASTLKTSLGPKGLDKIMVSPDGDVTVTNDGATIMKLMEVDHEIAKLMVQLSQ 97

  Fly    92 MQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLVSHKIEDYRN 156
            .||.|:||||..||||||||||.||.|:..||....|:||:|.|.:.|::.|..:......|.:|
  Fly    98 SQDDEIGDGTTGVVVLAGALLEQAEGLIDRGIHPIRIADGFELAAQCAIKQLDAIAQPFPVDPKN 162

  Fly   157 VEKVKEVLRTS----IMSKQYGQEDFLNDLVSKACVSILP-DEGTFNVDNIRICKILGSGLTKSE 216
            .|.:.::..|:    |::|.:.|   :.::...|.:::.. ::...|.:.|:|...:|..:..|.
  Fly   163 KEPLIQIAMTTLGSKIVNKCHRQ---MAEMAVDAVLNVADIEKKDVNFELIKIETKVGGRMEDSM 224

  Fly   217 VVRGMVFKRFVEGDVTYAE------KAKIVIFSCPVDIIQTETKGTVLIKSADELLSFSSGEESL 275
            :|:|::    |:..:::::      ..|:.|.:||.:..:.:||..:.:.||::..:....|:..
  Fly   225 LVKGVI----VDKTLSHSQMPKELRNVKLAILTCPFEPPKPKTKHKLDVTSAEDYRALREYEQEK 285

  Fly   276 LESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRRLSRSVNATVLPRITTPS 340
            ....:|.:.|||..:.:......|.|.|.|.:..|.|||.....::..::.:....::||....:
  Fly   286 FTQMVKQVKDAGATLAICQWGFDDEANHLLLQQELPAVRWVGGPEIELIAIATGGRIVPRFEELT 350

  Fly   341 QEELGYCDKVCIEELG---DTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCL 402
            .|:||....|.....|   |..:|.  .|.|:|:..|:.:||.....:.:.:|::.|||...:.|
  Fly   351 PEKLGVAGLVREMAFGTSKDKMLVI--EECKNSKAVTIFLRGGNAMIIAEAKRSIHDAICVVRSL 413

  Fly   403 TRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQL 467
            .:|.|.:.|.||.||..:..::..||.|..|:|||.|.|:.|||..|.|||||||::..|.:::|
  Fly   414 VKDSRIVYGGGAAEISCSLAVAKEADQLSTLEQYAFRAFSVALESIPLALAENSGLHPIETLSEL 478

  Fly   468 YLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAG 532
            ......|...::|.|......|  |.....:.:...||...:..:......|||:|. :.:|..|
  Fly   479 KARQVAEKKSSLGVDCMLSGDS--DMKSHNVVESLHSKKQQILLSTQLVKMILKIDD-VRSKNEG 540

  Fly   533 G 533
            |
  Fly   541 G 541

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 149/515 (29%)
Cpn60_TCP1 40..529 CDD:278544 146/502 (29%)
CCT5NP_523707.1 TCP1_epsilon 11..536 CDD:239455 149/514 (29%)
Cpn60_TCP1 45..534 CDD:278544 146/500 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453417
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
43.950

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