DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and Hsp60D

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_609656.1 Gene:Hsp60D / 34763 FlyBaseID:FBgn0032525 Length:558 Species:Drosophila melanogaster


Alignment Length:591 Identity:113/591 - (19%)
Similarity:212/591 - (35%) Gaps:179/591 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 AQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDV----EHPAAKLIVMASQMQDAEVGDG 100
            |..:.:..||.|.|.:|...:....:|.|..|:...:.:    :....:|:..|:...:.:||||
  Fly    38 ANAVATTLGPKGRNVLIEQLLISPRITKDGITVANNVQLGNRRQDMGVQLLRQATNNTNNKVGDG 102

  Fly   101 TNFVVVLAGAL-------LESAE---ELLRLGI-------------------TTAEISDGYEKAL 136
            |....:||..:       |..::   :|||.||                   |..::....:.||
  Fly   103 TTTATILARGIACQGMHVLRQSKVNVQLLREGILEGSRAVCDALGEMSQSVDTIGQVEAVAKVAL 167

  Fly   137 ---EKALEILPNLV-------------SHKIEDYRNVEKVKE--VLRTSIMSKQYGQEDFLNDLV 183
               |:..|::.:::             ||...|   ..|::|  .:.:...|..:.::....:| 
  Fly   168 NGDERLAELIGDIILELGDSGVILLKESHSPFD---EAKIQEGITIASGYYSPFFAKQSHTLEL- 228

  Fly   184 SKACVSILPDEGTFNVDNIR---------------ICKILGSGLTKSEVVRGM-------VFKRF 226
             :.|:.:|.......|:.|.               |.|..||.|.|..|:..:       ..|..
  Fly   229 -ENCLLLLTLAKIDQVEQILPALELARLKERPLLIIAKNFGSDLLKILVLNNLQGRVQVCAVKAP 292

  Fly   227 VEGDVTYAEKAKIVIFSCPVDIIQTETKGTVLIKSADELLSFSSGEESLLESQIKAIADAGVKVV 291
            ..|| ...|:.:.:.|:          .|..|::.|..|...|  ||.|.| .::|:.||     
  Fly   293 SFGD-EQCEEMEDIAFA----------TGGHLLEDASSLADLS--EEDLGE-VMEAVVDA----- 338

  Fly   292 VAGGKVGDMALHFLNKYGLMAVRLNSKF-DLRRL-SRSVNATVLPRITTPSQEELGYCDKVCIEE 354
                    ...|.|....:...::..:. |:|.| ..:.....|.|:.|               .
  Fly   339 --------KETHLLQPINVNEEQVQCRIQDIRELIDEAFTDVELDRLKT---------------R 380

  Fly   355 LGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEIEL 419
            ||       |.:|   .:||:.:.|.::..:.:.:...:||::..:....|| .:||.|      
  Fly   381 LG-------RLQG---HLATIFVGGTSELEVSERKDRFNDALHAVRVAISDG-VVPGGG------ 428

  Fly   420 ATQLSAYADTLPGLDQYA---VRKFANALEVFPKAL-------AENSGINGTEIVNQLYLAHNNE 474
                :||...:|.||:..   :.:.....|:...||       |.|:|::..|::.::.....| 
  Fly   429 ----TAYLRCIPVLDELPPTDIMELQVGREIVKDALRLPCYTIARNAGVDPNEVLRRVLKGSGN- 488

  Fly   475 AGKTIGFDIEAEK------ASTIDTTKAKLFDLYQSKFWGLKYAVGAA---ATILKVDQIIMAKR 530
                .|:|..|.:      ...:|.||.            |:.|:.:|   |::|...::::.|:
  Fly   489 ----YGYDAAAGEFGDLVVRGIVDPTKV------------LQSAMTSAAGIASLLATTEVLITKQ 537

  Fly   531 AGGPKV 536
            ...||:
  Fly   538 PTKPKI 543

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 110/582 (19%)
Cpn60_TCP1 40..529 CDD:278544 110/582 (19%)
Hsp60DNP_609656.1 PTZ00114 13..546 CDD:185455 113/591 (19%)
GroEL 18..536 CDD:239460 110/582 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453434
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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