DRSC/TRiP Functional Genomics Resources

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Protein Alignment CCT8 and CCT6

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_573066.1 Gene:CCT6 / 32518 FlyBaseID:FBgn0027329 Length:533 Species:Drosophila melanogaster


Alignment Length:558 Identity:157/558 - (28%)
Similarity:263/558 - (47%) Gaps:60/558 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MALSVPKAPGVSQMLKDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFV 65
            ::|..|||.            ::...:|:..||||.|.....||:..||.|..||:::......:
  Fly     4 ISLLNPKAE------------FARAAQALAINISAAKGLQDVMRTNLGPKGTVKMLVSGAGDIKI 56

  Fly    66 TSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISD 130
            |.|...::.|:.::||.|.:|..||..||...||||...|:|.|.||:.|:..|..|:....::|
  Fly    57 TKDGNVLLHEMQIQHPTASMIARASTAQDDSTGDGTTTTVMLIGELLKQADIYLSEGLHPRIMTD 121

  Fly   131 GYEKALEKALEILPNLVSHKIEDYRNVEKVKEVLRTSIMSKQY-GQEDFLNDLVSKACVSILPDE 194
            |:|||.:||||:|..:   |:....|.:.:.||..||:.:|.: ...|.|.|:...|.::|...:
  Fly   122 GFEKARDKALEVLDQV---KVPVEINKKNLVEVANTSLKTKVHPALADLLTDVCVNAVLTIASAD 183

  Fly   195 GTFNVD--NIRICKILGSGLTKSEVVRGMVF----------KRFVEGDVTYAEKAKIVIFSCPVD 247
            .|..||  .:.:.::.....|.:::|||:|.          ||.        |.|.|:..:..::
  Fly   184 KTKPVDLHMVELMEMQHKSDTDTQLVRGLVMDHGARHPDMPKRL--------ENAYILTANVSLE 240

  Fly   248 IIQTETKGTVLIKSADELLSFSSGEESLLESQIK-------AIADAGVKVVVAGGKVG--DMALH 303
            ..:.|.......|:|:|..:|...|...::.::|       ::.|...|..|...:.|  .::|.
  Fly   241 YEKAEVNSGFFYKTAEEREAFVRAEREFIDQRVKKVIELKRSVCDGTDKTFVLINQKGIDPISLD 305

  Fly   304 FLNKYGLMAVRLNSKFDLRRLSRSVNATVLPRITTPSQEELGYCDKVCIEELGDTTIVAFRNEGK 368
            .|.|.|::|:|...:.::.|||.:...|.:.......:|.|||...|....||:.. ..|..:.|
  Fly   306 ALAKEGILALRRAKRRNMERLSLACGGTAMNSFDDLQEEHLGYAGVVYEHVLGENK-YTFVEDCK 369

  Fly   369 DSRIATVVIRGATDNFMDDIERALDD---AINNFKCLTRDGRYLPGAGATEIELATQLSAYADTL 430
            :....|::|:|...:.:..|:.|:.|   ||||   ...|...:|||||.|:....:|.|:.||:
  Fly   370 NPLSVTILIKGPNKHTITQIKDAIRDGLRAINN---TIADKALVPGAGAFEVRAYNELVAFKDTI 431

  Fly   431 PGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDI-EAEKASTIDTT 494
            .|..:.||:.||:||.|.||.||.|||.:..:.:.:| ...:..:.:.:|.|: ..|....:|  
  Fly   432 KGKSRLAVQAFADALLVIPKTLAVNSGYDAQDTIVKL-TVEDRLSPELVGLDLATGEPMKPVD-- 493

  Fly   495 KAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAG 532
             ..::|.|..|...|......|:.:|.||:::   |||
  Fly   494 -LGVYDNYIVKKQILNSCSIIASNLLLVDEVM---RAG 527

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 150/534 (28%)
Cpn60_TCP1 40..529 CDD:278544 144/514 (28%)
CCT6NP_573066.1 chap_CCT_zeta 3..532 CDD:274088 157/558 (28%)
TCP1_zeta 7..528 CDD:239458 156/555 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453429
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
33.040

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