DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and cct5

DIOPT Version :10

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:524 Identity:165/524 - (31%)
Similarity:270/524 - (51%) Gaps:26/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEH 80
            :|.....:|| ||:..:|.|.|..|.|:|::.||||::||:::...:..||:|..||:..:||:|
Zfish    22 QDKKSRLTGL-EALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATILSMMDVDH 85

  Fly    81 PAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPN 145
            ..|||:|..|:.||.|:||||..||||||||||.||:||..||....|:|||::|.:.|:|.|..
Zfish    86 QIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAKIAIEQLDK 150

  Fly   146 LVSHKIEDYRNVEKVKEVLRTSIMSKQYGQ------EDFLNDLVSKACVSILPDEGTFNVDNIRI 204
            :......|..|.|.:.:...|::.||...:      |..:|.:::.|      |....:|| ..:
Zfish   151 IGDSFPVDPNNTESLVQTAMTTLGSKVINRCHRQMAEIAVNAILTVA------DMERKDVD-FEL 208

  Fly   205 CKI---LGSGLTKSEVVRGMVF-KRFVEGDVTYAEK-AKIVIFSCPVDIIQTETKGTVLIKSADE 264
            .|:   :|..|..:::::|::. |.|....:....| .||.|.:||.:..:.:||..:.:.|.::
Zfish   209 IKVEGKVGGKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVED 273

  Fly   265 LLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRRLSRSVN 329
            ..:....|:...:..|:.:.:.|..:.:......|.|.|.|.:..|.|:|.....::..::.:..
Zfish   274 YKALQKYEKDKFQEMIRQVKENGANLAICQWGFDDEANHLLLQNELPAIRWVGGPEIELIAIATG 338

  Fly   330 ATVLPRITTPSQEEL---GYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERA 391
            ..::||....:.|:|   |...::|.....|..:|.  .|.|:||..|:.|||.....:::.:||
Zfish   339 GRIVPRFCELTPEKLGTAGLVKEICFGTTKDRMLVI--EECKNSRAVTIFIRGGNKMIIEEAKRA 401

  Fly   392 LDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENS 456
            |.||:...:.|.||.|.:.|.||:||..|..::..||..|.|:|||:|.||:||||.|.||||||
Zfish   402 LHDALCVIRNLVRDNRIVYGGGASEIACALAVNEAADKCPSLEQYAMRAFADALEVIPMALAENS 466

  Fly   457 GINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILK 521
            |:|..:.:.::......|....:|  |:....||.|..:..:.:....|...:..|......|||
Zfish   467 GLNPIQTMTEVRARQVKENNSALG--IDCLHLSTNDMKQQHVIETLIGKKQQISLATQVVKMILK 529

  Fly   522 VDQI 525
            :|.|
Zfish   530 IDDI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 164/520 (32%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 165/524 (31%)

Return to query results.
Submit another query.