DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and cct5

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_997778.1 Gene:cct5 / 322258 ZFINID:ZDB-GENE-030131-977 Length:541 Species:Danio rerio


Alignment Length:524 Identity:165/524 - (31%)
Similarity:270/524 - (51%) Gaps:26/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    16 KDGARMYSGLEEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEH 80
            :|.....:|| ||:..:|.|.|..|.|:|::.||||::||:::...:..||:|..||:..:||:|
Zfish    22 QDKKSRLTGL-EALKSHILAAKAVANTLRTSLGPNGLDKMMVDKDGEVTVTNDGATILSMMDVDH 85

  Fly    81 PAAKLIVMASQMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPN 145
            ..|||:|..|:.||.|:||||..||||||||||.||:||..||....|:|||::|.:.|:|.|..
Zfish    86 QIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEQAEQLLDRGIHPIRIADGYDQAAKIAIEQLDK 150

  Fly   146 LVSHKIEDYRNVEKVKEVLRTSIMSKQYGQ------EDFLNDLVSKACVSILPDEGTFNVDNIRI 204
            :......|..|.|.:.:...|::.||...:      |..:|.:::.|      |....:|| ..:
Zfish   151 IGDSFPVDPNNTESLVQTAMTTLGSKVINRCHRQMAEIAVNAILTVA------DMERKDVD-FEL 208

  Fly   205 CKI---LGSGLTKSEVVRGMVF-KRFVEGDVTYAEK-AKIVIFSCPVDIIQTETKGTVLIKSADE 264
            .|:   :|..|..:::::|::. |.|....:....| .||.|.:||.:..:.:||..:.:.|.::
Zfish   209 IKVEGKVGGKLEDTQLIKGVIVDKEFSHPQMPKVLKDTKIAILTCPFEPPKPKTKHKLDVTSVED 273

  Fly   265 LLSFSSGEESLLESQIKAIADAGVKVVVAGGKVGDMALHFLNKYGLMAVRLNSKFDLRRLSRSVN 329
            ..:....|:...:..|:.:.:.|..:.:......|.|.|.|.:..|.|:|.....::..::.:..
Zfish   274 YKALQKYEKDKFQEMIRQVKENGANLAICQWGFDDEANHLLLQNELPAIRWVGGPEIELIAIATG 338

  Fly   330 ATVLPRITTPSQEEL---GYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERA 391
            ..::||....:.|:|   |...::|.....|..:|.  .|.|:||..|:.|||.....:::.:||
Zfish   339 GRIVPRFCELTPEKLGTAGLVKEICFGTTKDRMLVI--EECKNSRAVTIFIRGGNKMIIEEAKRA 401

  Fly   392 LDDAINNFKCLTRDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENS 456
            |.||:...:.|.||.|.:.|.||:||..|..::..||..|.|:|||:|.||:||||.|.||||||
Zfish   402 LHDALCVIRNLVRDNRIVYGGGASEIACALAVNEAADKCPSLEQYAMRAFADALEVIPMALAENS 466

  Fly   457 GINGTEIVNQLYLAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILK 521
            |:|..:.:.::......|....:|  |:....||.|..:..:.:....|...:..|......|||
Zfish   467 GLNPIQTMTEVRARQVKENNSALG--IDCLHLSTNDMKQQHVIETLIGKKQQISLATQVVKMILK 529

  Fly   522 VDQI 525
            :|.|
Zfish   530 IDDI 533

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 164/520 (32%)
Cpn60_TCP1 40..529 CDD:278544 157/500 (31%)
cct5NP_997778.1 TCP1_epsilon 10..535 CDD:239455 165/524 (31%)
Cpn60_TCP1 44..533 CDD:278544 156/499 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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