DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and CCT2

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_572524.1 Gene:CCT2 / 31838 FlyBaseID:FBgn0030086 Length:535 Species:Drosophila melanogaster


Alignment Length:497 Identity:144/497 - (28%)
Similarity:249/497 - (50%) Gaps:26/497 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 MRSAYGPNGMNKMII------NHIEKQFVTSDAGTIMRELDVEHPAAKLIVMASQMQDAEVGDGT 101
            ::|..||.||:|:::      .|:|   ||:|..||:|.:.|::||||::|..|::||.||||||
  Fly    38 VKSTLGPKGMDKILVATGRNAGHVE---VTNDGATILRAVGVDNPAAKILVDMSRVQDEEVGDGT 99

  Fly   102 NFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLV---SHKIEDYRNVEKVKEV 163
            ..|.|||..||..||:|:...:....|..|:.:|.:.|||.|....   |...|.:||  .:..:
  Fly   100 TSVTVLASELLREAEKLVEQKLHPQIIVSGWRQATQVALEALTAAAQDNSSSDEKFRN--DLLNI 162

  Fly   164 LRTSIMSKQYGQ-EDFLNDLVSKACVSILPDEGTFNVDNIRICKILGSGLTKSEVVRGMVF-KRF 226
            .||::.||...| :||..:|...|.:.:   :|:..:.:|:|.|..|..|..|.:..|.:. |:.
  Fly   163 ARTTLSSKILHQHKDFFANLAVDAVMRL---KGSGELKSIQIIKKSGGTLGDSFLDEGFLLDKKP 224

  Fly   227 VEGDVTYAEKAKIVIFSCPVDIIQTETKG-TVLIKSADELLSFSSGEESLLESQIKAIADAGVKV 290
            ........|.|:|:|.:.|:|..:.:..| ::.:.|..::......|:..::.::..|......|
  Fly   225 GVHQPQRIENARILIANTPMDTDKIKVFGSSIKVDSLAKIADLEMAEKEKMKEKVDKILKHKCNV 289

  Fly   291 VVAGGKVGDMALHFLNKYGLMAVRLNSKFD-LRRLSRSVNATVLPRITTPSQEELGYCDKVCIEE 354
            .:....:.:..........:|::. ::.|| :.||:......::.....||..:||.||.:....
  Fly   290 FINRQLIYNYPEQLFADARVMSIE-HADFDGIERLAYCTGGEIVSTFENPSLVKLGECDVIEQVM 353

  Fly   355 LGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCLTRDGRYLPGAGATEIEL 419
            :|:.|::.|... |.....|:||||||...:|:.:|:|.||:.......::.|.:.|.|.:|..:
  Fly   354 IGEDTLLRFSGV-KLGEACTIVIRGATQQILDEADRSLHDALCVLAATVKESRIIFGGGCSEALM 417

  Fly   420 ATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLYLAHNNEAGKTIGFDIE 484
            ||.:...|...||.:..|:..||.||...|.|:|:|:|.:..::|::|...| .:..:|:|.|:|
  Fly   418 ATAVLKKAAETPGKEAIAIEAFARALLSLPTAIADNAGYDSAQLVSELRAGH-AQGKQTLGLDME 481

  Fly   485 AEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQII 526
            ..|.:  |..:..:.:.:..|...|..|..||..||:||.||
  Fly   482 LGKVA--DVRELGITESFAVKRQVLMSASEAAEMILRVDNII 521

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 144/497 (29%)
Cpn60_TCP1 40..529 CDD:278544 144/497 (29%)
CCT2NP_572524.1 PTZ00212 1..530 CDD:185514 144/497 (29%)
TCP1_beta 10..527 CDD:239452 144/497 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453428
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11353
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.940

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