DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CCT8 and Cct6b

DIOPT Version :9

Sequence 1:NP_610418.1 Gene:CCT8 / 35882 FlyBaseID:FBgn0284436 Length:546 Species:Drosophila melanogaster
Sequence 2:NP_033969.2 Gene:Cct6b / 12467 MGIID:1329013 Length:531 Species:Mus musculus


Alignment Length:524 Identity:133/524 - (25%)
Similarity:242/524 - (46%) Gaps:22/524 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 EEAVFRNISACKEFAQTMRSAYGPNGMNKMIINHIEKQFVTSDAGTIMRELDVEHPAAKLIVMAS 90
            :.|:..||.|.:.....:|...||.|..||:::......:|.|...::.|:.::||.|.:|...:
Mouse    17 QAALAVNICAARGLQDVLRPTLGPKGALKMLVSGAGDIKLTKDGNVLLHEMQIQHPTASIIAKVA 81

  Fly    91 QMQDAEVGDGTNFVVVLAGALLESAEELLRLGITTAEISDGYEKALEKALEILPNLVSHKIEDYR 155
            ..||...||||...|::.|.||:.|:..:..|:....|::|::.|..||||:|..:   |::...
Mouse    82 AAQDHVTGDGTTSNVLIIGELLKQADLYISEGLHPRIITEGFDVAKTKALEVLDEI---KVQKEM 143

  Fly   156 NVEKVKEVLRTSIMSKQYGQ-EDFLNDLVSKACVSILPDEGTFNVDNIRICKILGSGLTKSEVVR 219
            ..|.:.:|.|||:.:|.:.: .|.|.:.|..:.::|.......::..:.|.::.....|.::::|
Mouse   144 KREILLDVARTSLQTKVHAELADILTEAVVDSVLAIRRPGVPIDLFMVEIVEMRHKSETDTQLIR 208

  Fly   220 GMVFKRFVEGDVTYAEKAKIVIFSCPVDI--IQTETKGTVLIKSADELLSFSSGEESLLESQIKA 282
            |:|............:.....|.:|.|.:  .:||.......|:.:|.......|...:|.:::.
Mouse   209 GLVLDHGARHPRMRKQVRDAYILTCNVSLEYEKTEVSSGFFYKTVEEKEKLVKAERKFIEDRVQK 273

  Fly   283 IADAGVKVVVAGGK---------VGDMALHFLNKYGLMAVRLNSKFDLRRLSRSVNATVLPRITT 338
            |.|...||.....|         :..::|..|.|:.::|:|...:.:|.||:.:.....:.....
Mouse   274 IIDLKQKVCAESNKGFVVINQKGIDPVSLEMLAKHNIVALRRAKRRNLERLTLACGGLAVNSFEG 338

  Fly   339 PSQEELGYCDKVCIEELGDTTIVAFRNEGKDSRIATVVIRGATDNFMDDIERALDDAINNFKCLT 403
            .|:|.||:...|....||:... .|..:..:....|::::|...:.:..|:.||.|.:...|...
Mouse   339 LSEECLGHAGLVFEYALGEEKF-TFIEDCVNPLSVTLLVKGPNKHTLIQIKDALRDGLRAVKNAI 402

  Fly   404 RDGRYLPGAGATEIELATQLSAYADTLPGLDQYAVRKFANALEVFPKALAENSGINGTEIVNQLY 468
            .||..:|||||.|:.:|..|..|...:.|..:..::.||:||.:.||.||:|||.:..|.:.::.
Mouse   403 EDGCVVPGAGAVEVAIAEALVNYKHRVQGRVRLGIQAFADALLIIPKVLAQNSGYDLQETLIKIQ 467

  Fly   469 LAHNNEAGKTIGFDIEAEKASTIDTTKAKLFDLYQSKFWGLKYAVGAAATILKVDQIIMAKRAGG 533
            ..| .|:.:.:|.|:..  ...:...:|.::|.|..|...|......|..||.||:|:   |||.
Mouse   468 TKH-AESKELLGIDLNT--GEPMAAAEAGIWDNYCVKKHLLHSCTVIATNILLVDEIM---RAGM 526

  Fly   534 PKVR 537
            ..:|
Mouse   527 SSLR 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CCT8NP_610418.1 TCP1_theta 20..529 CDD:239457 129/514 (25%)
Cpn60_TCP1 40..529 CDD:278544 125/500 (25%)
Cct6bNP_033969.2 chap_CCT_zeta 3..530 CDD:274088 132/522 (25%)
TCP1_zeta 8..526 CDD:239458 131/518 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D207515at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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