DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and gngt2b

DIOPT Version :9

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_001191261.1 Gene:gngt2b / 797361 ZFINID:ZDB-GENE-091020-4 Length:69 Species:Danio rerio


Alignment Length:58 Identity:16/58 - (27%)
Similarity:31/58 - (53%) Gaps:1/58 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLLTGFTSQKVNPFREKSSCTV 69
            ::.::||:.|....|..:|.:..:::.::.....||.|:.|....| |||:||..|.:
Zfish    12 KMELDQLKVEVNTARTAVSATAPEIIAFVEGLSAEDPLVKGVPEDK-NPFKEKGGCII 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 14/52 (27%)
gngt2bNP_001191261.1 GGL 8..69 CDD:128520 16/58 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170581988
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000162
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13809
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

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