DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and Gng14

DIOPT Version :9

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:XP_001064100.1 Gene:Gng14 / 685513 RGDID:1592634 Length:72 Species:Rattus norvegicus


Alignment Length:67 Identity:25/67 - (37%)
Similarity:38/67 - (56%) Gaps:1/67 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MSSSLQQQRVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLLTGFTSQKVNPFREKSSCT 68
            :.|.:.|.|..|||||.||.|.|..:|::...::::.||..:.|..|.|..: ..|||:||..|.
  Rat     7 IGSDIGQARRAVEQLRMEAGITRIKVSKAATDLLQFCTEQAKSDPFLVGIPA-ATNPFKEKKPCA 70

  Fly    69 VL 70
            :|
  Rat    71 IL 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 21/56 (38%)
Gng14XP_001064100.1 GGL 11..72 CDD:128520 23/61 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166341939
Domainoid 1 1.000 53 1.000 Domainoid score I11035
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 55 1.000 Inparanoid score I5343
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1581168at2759
OrthoFinder 1 1.000 - - FOG0000162
OrthoInspector 1 1.000 - - mtm12318
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13809
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
99.000

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