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Protein Alignment Ggamma1 and Kif3b
DIOPT Version :10
| Sequence 1: | NP_523662.1 |
Gene: | Ggamma1 / 35881 |
FlyBaseID: | FBgn0004921 |
Length: | 70 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001099999.1 |
Gene: | Kif3b / 296284 |
RGDID: | 1306815 |
Length: | 747 |
Species: | Rattus norvegicus |
| Alignment Length: | 40 |
Identity: | 13/40 - (32%) |
| Similarity: | 22/40 - (55%) |
Gaps: | 2/40 - (5%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 9 QQQRVVVEQLRREAAIDRQTIS--ESCAKMMKYITEHEQE 46
|:::.:.||.|||..|.:|..| |...::.:..|..:||
Rat 494 QKRQEIAEQKRREREIQQQMESRDEETLELKETYTSLQQE 533
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| Ggamma1 | NP_523662.1 |
GGL |
8..65 |
CDD:238024 |
13/40 (33%) |
| Kif3b | NP_001099999.1 |
KISc_KIF3 |
8..340 |
CDD:276822 |
|
| Smc |
<355..>581 |
CDD:440809 |
13/40 (33%) |
|
Blue background indicates that the domain is not in
the aligned region.
|
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