DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and Kif15

DIOPT Version :9

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_034750.1 Gene:Kif15 / 209737 MGIID:1098258 Length:1387 Species:Mus musculus


Alignment Length:95 Identity:18/95 - (18%)
Similarity:33/95 - (34%) Gaps:33/95 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 MSSSLQQQRVVVEQLRREAAIDRQTISESC-----------------AKMMKYITEHEQE----- 46
            :...|.|::..|||.:.|.::..:.:....                 |.:.|.:...|||     
Mouse  1103 LQHKLNQEKEEVEQKKNEFSLKMRQLEHVMGSATEYPQSPKTPPHFQAHLAKLLETQEQEIEDGR 1167

  Fly    47 ------DYLLTGFTSQKVNPFREKSSCTVL 70
                  .:|:|     |:|..||..:..:|
Mouse  1168 ASKTSLQHLVT-----KLNEDREVKNAEIL 1192

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 17/84 (20%)
Kif15NP_034750.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..23
KISc_KLP2_like 25..373 CDD:276824
KISc 26..370 CDD:214526
Kinesin-relat_1 463..551 CDD:289481
SMC_prok_B 520..1339 CDD:274008 18/95 (19%)
HMMR_C 1267..>1387 CDD:292530
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG4280
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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