DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and gpc-2

DIOPT Version :10

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_491935.1 Gene:gpc-2 / 172396 WormBaseID:WBGene00001682 Length:62 Species:Caenorhabditis elegans


Alignment Length:70 Identity:27/70 - (38%)
Similarity:42/70 - (60%) Gaps:8/70 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVMSSSLQQQRVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLLTGFTSQKVNPFREKS 65
            ||  .|.:|:   .|:.||.:..|:|..|:.|.|::.:: || .|||.|:... .:||||:.|||
 Worm     1 MD--KSDMQR---TVDSLRSQLNIERTPITVSAAELRRF-TE-SQEDPLVNPI-DKKVNPWAEKS 57

  Fly    66 SCTVL 70
            .|::|
 Worm    58 KCSML 62

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 20/56 (36%)
gpc-2NP_491935.1 GGL 3..62 CDD:128520 24/64 (38%)

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