DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and Kif3a

DIOPT Version :10

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:XP_006532388.1 Gene:Kif3a / 16568 MGIID:107689 Length:725 Species:Mus musculus


Alignment Length:52 Identity:11/52 - (21%)
Similarity:26/52 - (50%) Gaps:17/52 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDVMSSSLQQQRVV------VEQLRREAAIDRQTISESCAKMMKYITEHEQE 46
            :|:::.:.:|::::      :|:.||.|           .::.|.:.|.|||
Mouse   510 VDLLAKAEEQEKLLEESNMELEERRRRA-----------EQLRKELEEKEQE 550

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 10/45 (22%)
Kif3aXP_006532388.1 KISc_KIF3 13..345 CDD:276822
Smc <450..>614 CDD:440809 11/52 (21%)
Blue background indicates that the domain is not in the aligned region.

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