DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and gngt2.1

DIOPT Version :9

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_001165092.1 Gene:gngt2.1 / 100329130 XenbaseID:XB-GENE-5831105 Length:69 Species:Xenopus tropicalis


Alignment Length:58 Identity:23/58 - (39%)
Similarity:34/58 - (58%) Gaps:1/58 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLLTGFTSQKVNPFREKSSCTV 69
            ::.|||||:|...:|..:|:|..::..||..|..||.|:.|....| |||:||..|.:
 Frog    12 KMEVEQLRKEVKTERIMVSKSIPEIKSYIESHISEDPLVKGVPEDK-NPFKEKGGCLI 68

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 21/52 (40%)
gngt2.1NP_001165092.1 GGL 8..69 CDD:128520 23/58 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 55 1.000 Domainoid score I10936
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13809
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.010

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