DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ggamma1 and si:ch211-286b5.5

DIOPT Version :9

Sequence 1:NP_523662.1 Gene:Ggamma1 / 35881 FlyBaseID:FBgn0004921 Length:70 Species:Drosophila melanogaster
Sequence 2:NP_001186969.1 Gene:si:ch211-286b5.5 / 100003596 ZFINID:ZDB-GENE-121214-209 Length:72 Species:Danio rerio


Alignment Length:66 Identity:24/66 - (36%)
Similarity:38/66 - (57%) Gaps:1/66 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 SSSLQQQRVVVEQLRREAAIDRQTISESCAKMMKYITEHEQEDYLLTGFTSQKVNPFREKSSCTV 69
            |||:...:..|:|||.||.:||..:|::...::.:..::..:|.||... |.|.||||...||.:
Zfish     8 SSSVAAAQKAVKQLRHEADMDRMKVSQAAKDLINFCVQNAIKDPLLATI-SPKDNPFRPPKSCGL 71

  Fly    70 L 70
            |
Zfish    72 L 72

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ggamma1NP_523662.1 GGL 8..65 CDD:238024 18/56 (32%)
si:ch211-286b5.5NP_001186969.1 GGL 15..67 CDD:238024 18/52 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 54 0.240 Domainoid score I11186
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 54 1.000 Inparanoid score I5442
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1581168at2759
OrthoFinder 1 1.000 - - FOG0000162
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13809
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
77.070

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