DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and FBXL20

DIOPT Version :10

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_001357137.2 Gene:FBXL20 / 84961 HGNCID:24679 Length:438 Species:Homo sapiens


Alignment Length:542 Identity:116/542 - (21%)
Similarity:204/542 - (37%) Gaps:171/542 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   175 NQYLTDAILMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSSDHVLPSESVLTFKFILTIL 239
            |:.|...:|:|:.||   |:.:.:..|             ...|.:.:||..:.          .
Human    27 NKKLPKELLLRIFSF---LDVVTLCRC-------------AQVSRAWNVLALDG----------S 65

  Fly   240 NLQRRTLRVLNFSHTLIGQALLALCDLNLQ------LQRLYLAGCRQLNCTTILNFLATQPQLCA 298
            |.||  :.:.:|...:.|:.:     .|:.      |::|.|.||                    
Human    66 NWQR--IDLFDFQRDIEGRVV-----ENISKRCGGFLRKLSLRGC-------------------- 103

  Fly   299 LDLSATMCVNDENLAALVQTNPQLEHLKVNGCLSITNAGAIHLAKLKC--LKSLDISNCDNLTSS 361
                  :.|.|..|....|....:|.|.:|||...|:|....|:|. |  |:.||:::|.::|:.
Human   104 ------LGVGDNALRTFAQNCRNIEVLNLNGCTKTTDATCTSLSKF-CSKLRHLDLASCTSITNM 161

  Fly   362 GIIEGIASEENPVIQELNVSYL-QICEECIKAIASNLRCLRSLHLNHCVNGATDEAIQSVIGQLR 425
            .:  ...||..|::::||:|:. |:.::.|:|:......|::|.|..|.. ..|||::.:.....
Human   162 SL--KALSEGCPLLEQLNISWCDQVTKDGIQALVRGCGGLKALFLKGCTQ-LEDEALKYIGAHCP 223

  Fly   426 WLRELSLEHCSGLTDAALTGINISKLEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQSIK 490
            .|..|:|:.|..:||..|.                                              
Human   224 ELVTLNLQTCLQITDEGLI---------------------------------------------- 242

  Fly   491 ISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSLK-Y 554
                     .|.|...:.|::.|:                            ||:.|:|..|. .
Human   243 ---------TICRGCHKLQSLCAS----------------------------GCSNITDAILNAL 270

  Fly   555 GLKHIELRRLMLSNCQQISLLGMEAMASSCPSIEELDLSDCYNITDKTIQVVTSKLPRLKALHIS 619
            |.....||.|.::.|.|::.:|...:|.:|..:|::||.:|..|||.|:..::...|||:.|.:|
Human   271 GQNCPRLRILEVARCSQLTDVGFTTLARNCHELEKMDLEECVQITDSTLIQLSIHCPRLQVLSLS 335

  Fly   620 GCSQLTEHTLDAI--ITNCSC----LQTLSIYRCRSMYTDLE-ERLSGVKTLRNLNMDNLTSIDN 677
            .|..:|:   |.|  :.|.:|    |:.:.:..| .:.||.. |.|....:|..:.:.:...|..
Human   336 HCELITD---DGIRHLGNGACAHDQLEVIELDNC-PLITDASLEHLKSCHSLERIELYDCQQITR 396

  Fly   678 AEFFRLKKRLD----YXYFAAI 695
            |...||:..|.    :.|||.:
Human   397 AGIKRLRTHLPNIKVHAYFAPV 418

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 F-box_SF 11..58 CDD:459239
leucine-rich repeat 129..166 CDD:275381
leucine-rich repeat 167..192 CDD:275381 6/16 (38%)
leucine-rich repeat 193..244 CDD:275381 7/50 (14%)
C2 <231..274 CDD:472691 7/48 (15%)
leucine-rich repeat 246..269 CDD:275381 3/22 (14%)
AMN1 269..440 CDD:187754 44/179 (25%)
leucine-rich repeat 270..295 CDD:275381 5/24 (21%)
leucine-rich repeat 296..319 CDD:275381 4/22 (18%)
leucine-rich repeat 322..346 CDD:275381 9/23 (39%)
leucine-rich repeat 347..399 CDD:275381 14/52 (27%)
leucine-rich repeat 400..426 CDD:275381 7/25 (28%)
leucine-rich repeat 427..535 CDD:275381 11/107 (10%)
AMN1 515..>642 CDD:187754 34/133 (26%)
leucine-rich repeat 536..560 CDD:275381 6/24 (25%)
leucine-rich repeat 561..586 CDD:275381 8/24 (33%)
leucine-rich repeat 587..612 CDD:275381 8/24 (33%)
leucine-rich repeat 613..638 CDD:275381 8/26 (31%)
leucine-rich repeat 639..663 CDD:275381 6/24 (25%)
FBXL20NP_001357137.2 F-box_FBXL2-like 24..68 CDD:438887 12/66 (18%)
leucine-rich repeat 67..94 CDD:275381 5/33 (15%)
AMN1 95..291 CDD:187754 62/308 (20%)
leucine-rich repeat 95..114 CDD:275381 8/44 (18%)
leucine-rich repeat 121..146 CDD:275381 10/25 (40%)
leucine-rich repeat 147..172 CDD:275381 7/26 (27%)
leucine-rich repeat 173..198 CDD:275381 6/24 (25%)
leucine-rich repeat 199..224 CDD:275381 7/25 (28%)
AMN1 222..396 CDD:187754 52/260 (20%)
leucine-rich repeat 225..250 CDD:275381 9/79 (11%)
leucine-rich repeat 251..276 CDD:275381 8/52 (15%)
leucine-rich repeat 277..302 CDD:275381 8/24 (33%)
leucine-rich repeat 303..328 CDD:275381 8/24 (33%)
leucine-rich repeat 329..357 CDD:275381 9/30 (30%)
leucine-rich repeat 358..382 CDD:275381 6/24 (25%)
leucine-rich repeat 383..408 CDD:275381 6/24 (25%)
Blue background indicates that the domain is not in the aligned region.

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