DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and AT4G15475

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_567467.1 Gene:AT4G15475 / 827219 AraportID:AT4G15475 Length:610 Species:Arabidopsis thaliana


Alignment Length:718 Identity:157/718 - (21%)
Similarity:262/718 - (36%) Gaps:221/718 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LPLEIVLKIFSYL-GYSDLQAAGSTCQRWHAALDQAEFNQRTRVCFSKVVLSDQLSPGVDLMRCE 77
            ||.|::|:||..| ...:..|....|:||   |....|::.|      :.:....||...:....
plant    11 LPEELILEIFRRLESKPNRDACSLVCKRW---LSLERFSRTT------LRIGASFSPDDFISLLS 66

  Fly    78 RRFQHFLFEDVTLGQVKELM------------RFMGRTAQS--------------LALDNVD--- 113
            |||.:     :|...|.|.:            |..||.:.|              ...:||:   
plant    67 RRFLY-----ITSIHVDERISVSLPSLSPSPKRKRGRDSSSPSSSKRKKLTDKTHSGAENVESSS 126

  Fly   114 LNDKQFYGMLGVLPHLHSLSLKRCLPLFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYL 178
            |.|.....:....|.:.:|||..| |           |.|...|..||.....:|.|.| :..|:
plant   127 LTDTGLTALANGFPRIENLSLIWC-P-----------NVSSVGLCSLAQKCTSLKSLDL-QGCYV 178

  Fly   179 TDAILMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSSDHVLPSESVLTFKFILTILNLQR 243
            .|..|..:..|...||.:|:..|.               ..:|              :.:::|  
plant   179 GDQGLAAVGKFCKQLEELNLRFCE---------------GLTD--------------VGVIDL-- 212

  Fly   244 RTLRVLNFSHTL--IGQALLA-LCDLNLQ--------LQRLYL--------------AGCR---- 279
                |:..|.:|  ||.|..| :.||:|:        |:.|||              .||.    
plant   213 ----VVGCSKSLKSIGVAASAKITDLSLEAVGSHCKLLEVLYLDSEYIHDKGLIAVAQGCHRLKN 273

  Fly   280 -QLNCTTILNF-LATQPQLCA----LDLSATMCVNDENLAALVQTNPQLEHLKVNGCLSITNAGA 338
             :|.|.::.:. .|...:||.    |.|.:.....|:.:.|:.:.:.:|:.|.::.|..::..|.
plant   274 LKLQCVSVTDVAFAAVGELCTSLERLALYSFQHFTDKGMRAIGKGSKKLKDLTLSDCYFVSCKGL 338

  Fly   339 IHLAK-LKCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVSYLQ-ICEECIKAIASNLRCLR 401
            ..:|. .|.|:.::|:.|.|:.:.| ||.| .:..|.::||.:.|.| |....::.|....:.|.
plant   339 EAIAHGCKELERVEINGCHNIGTRG-IEAI-GKSCPRLKELALLYCQRIGNSALQEIGKGCKSLE 401

  Fly   402 SLHLNHCVNGATDEAIQSVIGQLRWLRELSLEHCSGLTDAALTGINISKLEMSRKQSGSQVSSMD 466
            .|||..| :|..|.|:.|:....|.|::|.:..|..:.:..:  |:|.|                
plant   402 ILHLVDC-SGIGDIAMCSIAKGCRNLKKLHIRRCYEIGNKGI--ISIGK---------------- 447

  Fly   467 NFYPPYSNTLAERDSLAGSLQSIKISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQ 531
                                                                             
plant   448 ----------------------------------------------------------------- 447

  Fly   532 QLRGLRSLNLRGCNKISDVSLKYGLKHIELRRLMLSNCQQISLLGMEAMASSCPSIEELDLSDCY 596
            ..:.|..|:||.|:|:.:.:|....|...|::|.:|.|.|||..|:.|:|..||.:..||:|...
plant   448 HCKSLTELSLRFCDKVGNKALIAIGKGCSLQQLNVSGCNQISDAGITAIARGCPQLTHLDISVLQ 512

  Fly   597 NITDKTIQVVTSKLPRLKALHISGCSQLTEHTLDAIITNCSCLQTLSIYRCRSMYTDLEERLSGV 661
            ||.|..:..:....|.||.|.:|.|..:|::.|:.::..|..|:|..:..|..:.:      :||
plant   513 NIGDMPLAELGEGCPMLKDLVLSHCHHITDNGLNHLVQKCKLLETCHMVYCPGITS------AGV 571

  Fly   662 KTL 664
            .|:
plant   572 ATV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 49/204 (24%)
leucine-rich repeat 270..295 CDD:275381 9/44 (20%)
leucine-rich repeat 296..319 CDD:275381 6/26 (23%)
leucine-rich repeat 322..346 CDD:275381 5/24 (21%)
leucine-rich repeat 347..399 CDD:275381 15/52 (29%)
leucine-rich repeat 400..426 CDD:275381 9/25 (36%)
leucine-rich repeat 427..535 CDD:275381 6/107 (6%)
AMN1 515..>642 CDD:187754 36/126 (29%)
leucine-rich repeat 536..560 CDD:275381 8/23 (35%)
leucine-rich repeat 561..586 CDD:275381 11/24 (46%)
leucine-rich repeat 587..612 CDD:275381 6/24 (25%)
leucine-rich repeat 613..638 CDD:275381 8/24 (33%)
leucine-rich repeat 639..663 CDD:275381 5/23 (22%)
F-box-like 12..>44 CDD:289689 11/30 (37%)
leucine-rich repeat 129..166 CDD:275381 10/36 (28%)
leucine-rich repeat 167..192 CDD:275381 7/24 (29%)
leucine-rich repeat 193..244 CDD:275381 6/50 (12%)
C2 <231..274 CDD:301316 12/53 (23%)
leucine-rich repeat 246..269 CDD:275381 9/25 (36%)
AT4G15475NP_567467.1 FBOX 11..>42 CDD:197608 12/33 (36%)
leucine-rich repeat 142..167 CDD:275381 10/36 (28%)
leucine-rich repeat 168..192 CDD:275381 7/24 (29%)
AMN1 190..359 CDD:187754 40/203 (20%)
leucine-rich repeat 193..218 CDD:275381 7/59 (12%)
leucine-rich repeat 220..245 CDD:275381 8/24 (33%)
leucine-rich repeat 246..263 CDD:275381 4/16 (25%)
leucine-rich repeat 271..295 CDD:275381 5/23 (22%)
leucine-rich repeat 296..321 CDD:275381 4/24 (17%)
leucine-rich repeat 322..347 CDD:275381 5/24 (21%)
AMN1 <345..514 CDD:187754 55/254 (22%)
leucine-rich repeat 348..369 CDD:275381 8/22 (36%)
leucine-rich repeat 374..399 CDD:275381 6/24 (25%)
leucine-rich repeat 400..425 CDD:275381 9/25 (36%)
leucine-rich repeat 426..451 CDD:275381 6/107 (6%)
AMN1 <448..586 CDD:187754 41/133 (31%)
leucine-rich repeat 452..476 CDD:275381 8/23 (35%)
leucine-rich repeat 477..502 CDD:275381 11/24 (46%)
leucine-rich repeat 503..528 CDD:275381 6/24 (25%)
leucine-rich repeat 529..554 CDD:275381 8/24 (33%)
leucine-rich repeat 555..580 CDD:275381 6/26 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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