DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and AT2G36370

DIOPT Version :10

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_565845.3 Gene:AT2G36370 / 818210 AraportID:AT2G36370 Length:940 Species:Arabidopsis thaliana


Alignment Length:835 Identity:161/835 - (19%)
Similarity:300/835 - (35%) Gaps:226/835 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LHRYDDLPLEIV----LKIFSYLGYSDLQAAGSTCQRWHAALDQAEFNQRTRVCFSKVVLSD--- 65
            |:.||   :||.    |.:|....|..::...|.|:.|.:.|..:..|     ...||.|||   
plant   100 LYGYD---IEITSSSFLPLFESALYFGVEKLLSICKNWLSVLASSNDN-----ALPKVELSDLIQ 156

  Fly    66 ----------QLSPGVDLMRCERRFQHFLFEDVTLGQVK-ELMRFMGRTAQSLALDNVDLNDKQF 119
                      :..|.:.:....:.|. .:..|...|.|. ||:.:..:.........:||.|...
plant   157 IWSFGLEHAGEFVPDLCVAYLAKNFM-LVKSDKYFGNVPYELLMWCVKHPHLTVHSEMDLVDGLL 220

  Fly   120 Y-----GMLGVLPHL---HSLSLKR-----CLPL-FMSG-SFLDSYNNSCPDLNDLASNLAGIKE 169
            .     |.|..||..   ::::|..     .||| |::| |....::.......:|.:.|  :|.
plant   221 IWLDAGGRLSDLPESSQDNTINLMEQVRFSLLPLWFIAGRSKSHGFSKFADQSIELVTKL--MKM 283

  Fly   170 LTLCENQYLTDA----ILMRLTSFMPSLEAINMSGC-------------------HIAFHNAIHR 211
            .:.|....|||.    :.:|||.:.   |.:::|||                   ::.:..::..
plant   284 PSTCLVDSLTDGPPTDVRVRLTEYS---EILDLSGCPQLNEASLLLSILPNSYFANLRWRKSLES 345

  Fly   212 RFYPATSSSDH----------VLPSESV----------LTFKFILT----------------ILN 240
            ..........|          :|..|||          |.:|.::.                :||
plant   346 FLKNPDDDERHQEQISHRTLPILSFESVKEIDISKCQRLDYKVVIKCFSKSFPSLRKLRAAYLLN 410

  Fly   241 LQRRTL--RVLNFS----------------------HTLIGQALLA------------LCDLNLQ 269
            ::..||  .:|||.                      ::..|..||:            :||:.|:
plant   411 IKVSTLLELLLNFRELTEVDLTVDVSPIIPVQASVFYSGQGHCLLSSITRLTLEGRSDICDMELR 475

  Fly   270 --------LQRLYLAGCRQLNCTTILNFLATQPQLCALDLSATMCVNDENLAALVQTNPQLEHLK 326
                    |..|.:.||..|:...|.:.:....:||:|.:..|....:..||.....:...||:.
plant   476 SISRVCESLCYLNIKGCALLSDACIASVIQRCKKLCSLIVCYTSFSENSILALCATISMTNEHMD 540

  Fly   327 VNGCLSITNAGAIHLAKLKCLKSLDISNCDNLTSSGIIEGIASEENPV------------IQELN 379
            :|...|  |...:|::|.:.:....:.|.  :|.|..::.:...:..|            ::.|:
plant   541 INSVAS--NLQTLHMSKCEGISETSLLNL--ITHSQKMKSLCLRDTKVSDSVLCEFPGSTLEALD 601

  Fly   380 VSYLQICEECIKAIASNLRCLRSLHLNHC-------VNGATDEAIQSVIGQLRWLRELSLEHCSG 437
            :|...|....:..:.|....|::|....|       |:|.||.....|.||       .:..|..
plant   602 ISNTTISWMALARVISRNPNLKTLKARGCKNLLQLEVDGRTDNFSPLVSGQ-------EVFKCLS 659

  Fly   438 LTDAALTGINISKLEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQSIKISLRSKAEDEIV 502
                  .|..:.:||:.   .|....|.::..|           .|..|:.|.:.|.:...::::
plant   660 ------KGSGLEELEIG---WGFSYFSFESLRP-----------AASFLRVISVGLGASLGEDVL 704

  Fly   503 RDARRKQAMLAAYEMNLIREDDFEGHNI-QQLRGLRSLNLRGC-NKISDVSLKYGLKHIELRRLM 565
            :.......:|.:..::.....|....:: ..|:.|:.|.|..| .:||..|.|:.:.:  ||:|.
plant   705 KLLPSTCPLLESIVLHFQEISDSALTSVLTSLKHLQELALSYCFGEISLQSFKFSMPN--LRKLR 767

  Fly   566 LSNCQQ-ISLLGMEAMASSCPSIEELDLSDCYNITDKTIQVVTSKLPRLKALHISGCSQLTEHTL 629
            |....: ::...:..:..|||::.||.|..|.::|.....::::..|.:.:||:..|..:||:.:
plant   768 LERVTRWMTNDDLLVLTQSCPNLTELSLVGCLHLTSDCQPIISAGWPGMISLHLEECGSITENGV 832

  Fly   630 DAIITNCSCLQTLSIYRCRSMYTDLEERLSGVKTLRNLNMD--------NLTSID 676
                        .|:|.|.:: .||..|.:|....::..:|        .|.|:|
plant   833 ------------ASLYGCIAL-EDLFLRHNGSGIQKSFLLDATLKFPMLRLVSLD 874

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 F-box_SF 11..58 CDD:459239 12/50 (24%)
leucine-rich repeat 129..166 CDD:275381 9/46 (20%)
leucine-rich repeat 167..192 CDD:275381 8/28 (29%)
leucine-rich repeat 193..244 CDD:275381 13/105 (12%)
C2 <231..274 CDD:472691 15/102 (15%)
leucine-rich repeat 246..269 CDD:275381 9/58 (16%)
AMN1 269..440 CDD:187754 38/197 (19%)
leucine-rich repeat 270..295 CDD:275381 6/24 (25%)
leucine-rich repeat 296..319 CDD:275381 6/22 (27%)
leucine-rich repeat 322..346 CDD:275381 7/23 (30%)
leucine-rich repeat 347..399 CDD:275381 8/63 (13%)
leucine-rich repeat 400..426 CDD:275381 10/32 (31%)
leucine-rich repeat 427..535 CDD:275381 14/108 (13%)
AMN1 515..>642 CDD:187754 28/129 (22%)
leucine-rich repeat 536..560 CDD:275381 8/24 (33%)
leucine-rich repeat 561..586 CDD:275381 6/25 (24%)
leucine-rich repeat 587..612 CDD:275381 5/24 (21%)
leucine-rich repeat 613..638 CDD:275381 5/24 (21%)
leucine-rich repeat 639..663 CDD:275381 7/23 (30%)
AT2G36370NP_565845.3 PHA03098 42..>252 CDD:222983 33/160 (21%)
BACK 155..258 CDD:197943 19/103 (18%)
leucine-rich repeat 373..399 CDD:275381 3/25 (12%)
leucine-rich repeat 400..425 CDD:275381 7/24 (29%)
leucine-rich repeat 426..457 CDD:275381 3/30 (10%)
AMN1 435..653 CDD:187754 43/228 (19%)
leucine-rich repeat 458..483 CDD:275381 3/24 (13%)
leucine-rich repeat 484..509 CDD:275381 6/24 (25%)
leucine-rich repeat 510..547 CDD:275381 10/38 (26%)
leucine-rich repeat 548..573 CDD:275381 5/26 (19%)
leucine-rich repeat 597..621 CDD:275381 4/23 (17%)
leucine-rich repeat 633..663 CDD:275381 9/42 (21%)
leucine-rich repeat 664..684 CDD:275381 5/33 (15%)
leucine-rich repeat 688..713 CDD:275381 3/24 (13%)
leucine-rich repeat 714..738 CDD:275381 3/23 (13%)
leucine-rich repeat 739..762 CDD:275381 8/22 (36%)
leucine-rich repeat 763..789 CDD:275381 6/25 (24%)
leucine-rich repeat 790..815 CDD:275381 5/24 (21%)
leucine-rich repeat 816..835 CDD:275381 5/30 (17%)
leucine-rich repeat 841..867 CDD:275381 5/26 (19%)

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