DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and FBXL18

DIOPT Version :10

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_001308142.1 Gene:FBXL18 / 80028 HGNCID:21874 Length:801 Species:Homo sapiens


Alignment Length:780 Identity:172/780 - (22%)
Similarity:265/780 - (33%) Gaps:256/780 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 SGLEYGLH--RYDDLPLEIVLKIFSYLGYSDL-QAAGSTCQRWHAALDQAEFNQRTRVCFSKVVL 63
            :|:..|:|  .:.|   ||:|.|.|::..:|| .....||::..|            :|..|.::
Human    20 AGMADGVHLLGFSD---EILLHILSHVPSTDLILNVRRTCRKLAA------------LCLDKSLI 69

  Fly    64 SDQLSPGVDLMRCERRFQHFLFEDVTLGQVKELMRFMGRTAQSLA-------------------- 108
            ...|        .::.:|  ..||    :|::|::.:||..|.|:                    
Human    70 HTVL--------LQKDYQ--ASED----KVRQLVKEIGREIQQLSMAGCYWLPGSTVEHVARCRS 120

  Fly   109 -----LDNVDLNDKQFYGMLGVLPHLHSLSLKRCLPLFMSGSFLDSYNNSCPDLNDLAS----NL 164
                 |....|...:...||..|.||.||::.      :|..|         |.:.|:|    .|
Human   121 LVKVNLSGCHLTSLRLSKMLSALQHLRSLAID------VSPGF---------DASQLSSECKATL 170

  Fly   165 AGIKELTLCENQYLTDAILMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSSDHVLPSESV 229
            :.::||              :.|.|.||...:                  |..:|.:.:|     
Human   171 SRVREL--------------KQTLFTPSYGVV------------------PCCTSLEKLL----- 198

  Fly   230 LTFKFILTILNLQRRTLRVLNFSHTLIGQ-------------ALLALCDLNLQLQRLYLAGCRQL 281
            |.|:.      |.|.....:.....::||             |.||...:|.::.|||||.....
Human   199 LYFEI------LDRTREGAILSGQLMVGQSNVPHYQNLRVFYARLAPGYINQEVVRLYLAVLSDR 257

  Fly   282 NCTTILNFLATQPQLCA--------LDLSATMCVNDENLAAL------VQTNPQLEHLKVNG--- 329
            ....:..||.:.|...|        ||..|...|.|    ||      :..:..|:|:|.|.   
Human   258 TPQNLHAFLISVPGSFAESGATKNLLDSMARNVVLD----ALQLPKSWLNGSSLLQHMKFNNPFY 318

  Fly   330 -----CLSITNAGAIHLAK--------LKCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVS 381
                 |   |.:|. ||.:        |:.|.||::|.|.:..|...:...|.:      :::.|
Human   319 FSFSRC---TLSGG-HLIQQVINGGKDLRSLASLNLSGCVHCLSPDSLLRKAED------DIDSS 373

  Fly   382 YLQICEECIKAIASNLRCLRSLHLN------HCVNGATDEAIQSVIGQLRWLRELSLEHCS---- 436
            .|    |.:.|...|||     |||      |...|......| ::.:||.||.|||..||    
Human   374 IL----ETLVASCCNLR-----HLNLSAAHHHSSEGLGRHLCQ-LLARLRHLRSLSLPVCSVADS 428

  Fly   437 ------------------GLTDAALTGINISKLEMSRKQSGSQVSSMDNFYPPYSN-TLAERDSL 482
                              |.......|:.......| .|:..|.||:  |:....| ...|...|
Human   429 APRADRAPAQPAMHAVPRGFGKKVRVGVQSCPSPFS-GQACPQPSSV--FWSLLKNLPFLEHLEL 490

  Fly   483 AGSLQSIKISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQLRGLRSLNLRGCNKI 547
            .||..|..:.....|....:....|.|::           .|.|...|.||..||.|.|.....:
Human   491 IGSNFSSAMPRNEPAIRNSLPPCSRAQSV-----------GDSEVAAIGQLAFLRHLTLAQLPSV 544

  Fly   548 SDVS--LKYGLKHIELRRLMLSNCQQISLLG-------MEAMASSCPSIEELDLSDCYNITDKTI 603
            ...|  :..||:..:||.|.|:|   :.::|       :..|...|..:.:|.|...|...:...
Human   545 LTGSGLVNIGLQCQQLRSLSLAN---LGMMGKVVYMPALSDMLKHCKRLRDLRLEQPYFSANAQF 606

  Fly   604 QVVTSKLPRLKALHISGCSQLTEHTL--DAIIT-NCSCLQTL--------SIYRCRSMYTDLEER 657
            ....|:.|.|:.|    |......||  ||::. ...|||.:        |:..|:|:...|..|
Human   607 FQALSQCPSLQRL----CLVSRSGTLQPDAVLAFMARCLQVVMCHLFTGESLATCKSLQQSLLRR 667

  Fly   658  657
            Human   668  667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 F-box_SF 11..58 CDD:459239 11/47 (23%)
leucine-rich repeat 129..166 CDD:275381 9/40 (23%)
leucine-rich repeat 167..192 CDD:275381 4/24 (17%)
leucine-rich repeat 193..244 CDD:275381 6/50 (12%)
C2 <231..274 CDD:472691 10/55 (18%)
leucine-rich repeat 246..269 CDD:275381 6/35 (17%)
AMN1 269..440 CDD:187754 56/228 (25%)
leucine-rich repeat 270..295 CDD:275381 7/24 (29%)
leucine-rich repeat 296..319 CDD:275381 8/36 (22%)
leucine-rich repeat 322..346 CDD:275381 10/39 (26%)
leucine-rich repeat 347..399 CDD:275381 13/51 (25%)
leucine-rich repeat 400..426 CDD:275381 7/31 (23%)
leucine-rich repeat 427..535 CDD:275381 29/130 (22%)
AMN1 515..>642 CDD:187754 35/138 (25%)
leucine-rich repeat 536..560 CDD:275381 7/25 (28%)
leucine-rich repeat 561..586 CDD:275381 8/31 (26%)
leucine-rich repeat 587..612 CDD:275381 4/24 (17%)
leucine-rich repeat 613..638 CDD:275381 7/27 (26%)
leucine-rich repeat 639..663 CDD:275381 7/27 (26%)
FBXL18NP_001308142.1 F-box_FBXL18 28..71 CDD:438900 13/57 (23%)
FBXL18_LRR 85..678 CDD:466163 152/686 (22%)
leucine-rich repeat 345..384 CDD:275381 11/48 (23%)
leucine-rich repeat 385..414 CDD:275381 9/34 (26%)
leucine-rich repeat 415..484 CDD:275381 16/71 (23%)
leucine-rich repeat 451..476 CDD:275381 6/27 (22%)
leucine-rich repeat 485..532 CDD:275381 13/57 (23%)
leucine-rich repeat 533..559 CDD:275381 7/25 (28%)
leucine-rich repeat 560..589 CDD:275381 8/31 (26%)
leucine-rich repeat 590..615 CDD:275381 4/24 (17%)
leucine-rich repeat 616..640 CDD:275381 7/27 (26%)

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