Sequence 1: | NP_001260812.1 | Gene: | CG8272 / 35875 | FlyBaseID: | FBgn0033337 | Length: | 710 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006533964.2 | Gene: | Fbxo39 / 628100 | MGIID: | 3505735 | Length: | 480 | Species: | Mus musculus |
Alignment Length: | 586 | Identity: | 107/586 - (18%) |
---|---|---|---|
Similarity: | 192/586 - (32%) | Gaps: | 214/586 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 14 LPLEIVLKIFSYLGYSDLQAAGSTCQRWHAALDQAEFNQRTRVCF----SKVVLSDQLSPGVDLM 74
Fly 75 RCERRFQHFLFEDVTLGQVKELMRFMGRTAQSLALDNVDLNDKQFYGMLGVLPHLHSLSLKRCLP 139
Fly 140 LFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCE---NQYLTDAILMRLTSFMPS----LEAIN 197
Fly 198 MSGCHIAFHNAIHRRFYPATSSSDHVLPSESVLTFKFILTILNLQRRTLRVLNFSHTLIGQALLA 262
Fly 263 LCDLNLQLQRLYLAGCRQLNCTTILNFLATQPQLCALDLSATMCVNDENLAALVQTNPQLEHLKV 327
Fly 328 NGCLSITNAGAIHLAKLKCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVSYLQICEECIKA 392
Fly 393 IASNLRCLRSLHLNHCVNGATD-----EAIQSVIGQLRWLRELSLEHCSGLTDAALTGINISKLE 452
Fly 453 MSRKQSGSQVSSMDNFYPPYSNTLAE--------RDSLAGSLQSIKISLRS------------KA 497
Fly 498 EDEIVRDARRKQAMLAA---------YEMNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSLK 553
Fly 554 Y 554 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8272 | NP_001260812.1 | AMN1 | 269..440 | CDD:187754 | 35/175 (20%) |
leucine-rich repeat | 270..295 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 296..319 | CDD:275381 | 7/22 (32%) | ||
leucine-rich repeat | 322..346 | CDD:275381 | 5/23 (22%) | ||
leucine-rich repeat | 347..399 | CDD:275381 | 6/51 (12%) | ||
leucine-rich repeat | 400..426 | CDD:275381 | 4/30 (13%) | ||
leucine-rich repeat | 427..535 | CDD:275381 | 23/136 (17%) | ||
AMN1 | 515..>642 | CDD:187754 | 13/40 (33%) | ||
leucine-rich repeat | 536..560 | CDD:275381 | 7/19 (37%) | ||
leucine-rich repeat | 561..586 | CDD:275381 | |||
leucine-rich repeat | 587..612 | CDD:275381 | |||
leucine-rich repeat | 613..638 | CDD:275381 | |||
leucine-rich repeat | 639..663 | CDD:275381 | |||
F-box-like | 12..>44 | CDD:289689 | 9/29 (31%) | ||
leucine-rich repeat | 129..166 | CDD:275381 | 6/36 (17%) | ||
leucine-rich repeat | 167..192 | CDD:275381 | 5/27 (19%) | ||
leucine-rich repeat | 193..244 | CDD:275381 | 8/50 (16%) | ||
C2 | <231..274 | CDD:301316 | 5/42 (12%) | ||
leucine-rich repeat | 246..269 | CDD:275381 | 3/22 (14%) | ||
Fbxo39 | XP_006533964.2 | F-box-like | 53..94 | CDD:372399 | 10/37 (27%) |
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |