DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and FBXL12

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:XP_016882401.1 Gene:FBXL12 / 54850 HGNCID:13611 Length:343 Species:Homo sapiens


Alignment Length:381 Identity:72/381 - (18%)
Similarity:129/381 - (33%) Gaps:163/381 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   265 DLNLQLQ--------RLYLAGCRQLNCTTILNFLATQPQLCALDLSATMCVNDENLAALVQTNPQ 321
            |.:||::        |.|:|.  :|:...:..:|.:..|  |..||..:      |.||.|..|.
Human    66 DPHLQMRPKVMWHLLRRYMAS--RLHSLRMGGYLFSGSQ--APQLSPAL------LRALGQKCPN 120

  Fly   322 LEHLKVNGCLSITNAGAIHLAKL-KCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVSYLQI 385
            |:.|    ||.:.:...:.:..| ..|::|::.:|:.     .:..:..:::|.:..|       
Human   121 LKRL----CLHVADLSMVPITSLPSTLRTLELHSCEI-----SMAWLHKQQDPTVLPL------- 169

  Fly   386 CEECIKAIASNLRCLRSLHLNHCVNGATDEAIQSVIGQLRWLRELSLEHCSGLTDAALTGINISK 450
             .|||  :...:...|..||    .|.|         :.|.||.|.|.....:|:   ||::   
Human   170 -LECI--VLDRVPAFRDEHL----QGLT---------RFRALRSLVLGGTYRVTE---TGLD--- 212

  Fly   451 LEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQSIKISLRSKAEDEIVRDARRKQAMLAAY 515
                                            ||                               
Human   213 --------------------------------AG------------------------------- 214

  Fly   516 EMNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSLKYGLKHI-ELRRLMLS----NCQQISLL 575
                          :|:|..|:.|.:.||...:|.:|....:|: ::|::.|:    :...:::|
Human   215 --------------LQELSYLQRLEVLGCTLSADSTLLAISRHLRDVRKIRLTVRGLSAPGLAVL 265

  Fly   576 -GMEAMASSC----------PSIEELDLSDCYNITDKTIQVVTSKLPRLKALHISG 620
             ||.|:.|.|          ||..|: ||.|..            :|:|:.|.:.|
Human   266 EGMPALESLCLQGPLVTPEMPSPTEI-LSSCLT------------MPKLRVLELQG 308

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 38/179 (21%)
leucine-rich repeat 270..295 CDD:275381 5/32 (16%)
leucine-rich repeat 296..319 CDD:275381 7/22 (32%)
leucine-rich repeat 322..346 CDD:275381 5/24 (21%)
leucine-rich repeat 347..399 CDD:275381 8/51 (16%)
leucine-rich repeat 400..426 CDD:275381 5/25 (20%)
leucine-rich repeat 427..535 CDD:275381 11/107 (10%)
AMN1 515..>642 CDD:187754 27/122 (22%)
leucine-rich repeat 536..560 CDD:275381 7/24 (29%)
leucine-rich repeat 561..586 CDD:275381 8/39 (21%)
leucine-rich repeat 587..612 CDD:275381 4/24 (17%)
leucine-rich repeat 613..638 CDD:275381 3/8 (38%)
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689
leucine-rich repeat 129..166 CDD:275381
leucine-rich repeat 167..192 CDD:275381
leucine-rich repeat 193..244 CDD:275381
C2 <231..274 CDD:301316 4/16 (25%)
leucine-rich repeat 246..269 CDD:275381 1/3 (33%)
FBXL12XP_016882401.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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