DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and Fbxl17

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_056609.1 Gene:Fbxl17 / 50758 MGIID:1354704 Length:701 Species:Mus musculus


Alignment Length:351 Identity:81/351 - (23%)
Similarity:145/351 - (41%) Gaps:86/351 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 SLSL-KRCLPLFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAILMRLTSFMPSLE 194
            :||| :|||    |.|.:      |....||..:....|:|.|...|.:||.:|.::.|...::.
Mouse   335 NLSLNERCL----SASLV------CKYWRDLCLDFQFWKQLDLSSRQQVTDELLEKIASRSQN
II 389

  Fly   195 AINMSGCH---------IAFH--NAIHRRFYPATSSSD----------------HVLPSESVLTF 232
            .||:|.|.         :||.  ..:....|.....||                || .::..||.
Mouse   390 EINISDCRSLSDSGVCVLAFKCPGLLRYTAYRCKQLSDTSIIAVASHCPLLQKVHV-GNQDKLTD 453

  Fly   233 KFILTILNLQRRTLRVLNFS--HTLIGQALLALCDLNLQLQRLYLAGCRQLNCTTILNFLATQPQ 295
            :. |..|..:.|.|:.::|.  :.:..:.::.:....|:|||:|                     
Mouse   454 EG-LKQLGSRCRELKDIHFGQCYKISDEGMIVIAKSCLKLQRIY--------------------- 496

  Fly   296 LCALDLSATMCVNDENLAALVQTNPQLEHLKVNGCLSITNAGAIHLAKLKCLKSLDISNCDNLTS 360
                 :.....|.|:::.|..:..|:|:::...|| |:|:.|.|||.||:.|.|||:.:...|.:
Mouse   497 -----MQENKLVTDQSVKAFAEHCPELQYVGFMGC-SVTSKGVIHLTKLRNLSSLDLRHITELDN 555

  Fly   361 SGIIEGIASEENPVIQEL-NVSYLQIC------EECIKAIASNLRCLRSLHLNHCVNGATDEAIQ 418
            ..::|        :::.. |:|.|.:|      :.|::.||...:.|:.|:|..|  ..||.|:.
Mouse   556 ETVME--------IVKRCKNLSSLNLCLNWIINDRCVEVIAKEGQNLKELYLVSC--KITDYALI 610

  Fly   419 SVIGQLRWLRELSLEHCSGLTDAALT 444
            ::......:..:.:..|..:||...|
Mouse   611 AIGRYSVTIETVDVGWCKEITDQGAT 636

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 40/177 (23%)
leucine-rich repeat 270..295 CDD:275381 4/24 (17%)
leucine-rich repeat 296..319 CDD:275381 3/22 (14%)
leucine-rich repeat 322..346 CDD:275381 11/23 (48%)
leucine-rich repeat 347..399 CDD:275381 13/58 (22%)
leucine-rich repeat 400..426 CDD:275381 7/25 (28%)
leucine-rich repeat 427..535 CDD:275381 4/18 (22%)
AMN1 515..>642 CDD:187754
leucine-rich repeat 536..560 CDD:275381
leucine-rich repeat 561..586 CDD:275381
leucine-rich repeat 587..612 CDD:275381
leucine-rich repeat 613..638 CDD:275381
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689
leucine-rich repeat 129..166 CDD:275381 11/35 (31%)
leucine-rich repeat 167..192 CDD:275381 8/24 (33%)
leucine-rich repeat 193..244 CDD:275381 15/77 (19%)
C2 <231..274 CDD:301316 10/44 (23%)
leucine-rich repeat 246..269 CDD:275381 2/24 (8%)
Fbxl17NP_056609.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 73..93
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 227..250
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 279..321
F-box-like 321..368 CDD:289689 13/42 (31%)
leucine-rich repeat 362..387 CDD:275381 8/24 (33%)
leucine-rich repeat 388..413 CDD:275381 6/24 (25%)
AMN1 411..573 CDD:187754 41/198 (21%)
leucine-rich repeat 414..439 CDD:275381 3/24 (13%)
leucine-rich repeat 440..465 CDD:275381 6/26 (23%)
leucine-rich repeat 466..491 CDD:275381 2/24 (8%)
leucine-rich repeat 492..517 CDD:275381 7/50 (14%)
leucine-rich repeat 545..567 CDD:275381 4/29 (14%)
leucine-rich repeat 568..593 CDD:275381 6/24 (25%)
leucine-rich repeat 594..618 CDD:275381 7/25 (28%)
leucine-rich repeat 619..644 CDD:275381 4/18 (22%)
leucine-rich repeat 645..670 CDD:275381
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167843109
Domainoid 1 1.000 51 1.000 Domainoid score I11563
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.740

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