Sequence 1: | NP_001260812.1 | Gene: | CG8272 / 35875 | FlyBaseID: | FBgn0033337 | Length: | 710 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038942467.1 | Gene: | Fbxl16 / 494223 | RGDID: | 1309127 | Length: | 488 | Species: | Rattus norvegicus |
Alignment Length: | 538 | Identity: | 101/538 - (18%) |
---|---|---|---|
Similarity: | 166/538 - (30%) | Gaps: | 239/538 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 124 GVLPHLHSLSLKRCLP------LFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAI 182
Fly 183 LMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSSDHVLPSESVLTFKFILTILNLQRRTLR 247
Fly 248 VLNFSHTLIGQALLALCDLNLQ-LQRLYLAGCRQLNCTTILNFLATQPQLCALDLSATMCVN--D 309
Fly 310 ENLAALVQTNPQLEHLKVN--------------------------GCLSITNAGAIHLA-KLKCL 347
Fly 348 KSLDISNCDNLTSSGIIEGIASEENPVIQELNVSYLQICEECIKAIASNLRCLRSLHLNHCVNGA 412
Fly 413 TDEAIQSVIGQLRWLRELSLEHCS---------GLTDAALTGINISKLEMSRKQSGSQVSSMDNF 468
Fly 469 YPPYSNTLAERDSLAGSLQSIKISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQL 533
Fly 534 RGLRSLNLRGCNKISDVSLKYGLKHI----ELRRLMLSNCQQISLLGMEAMASSCPSIEELDLSD 594
Fly 595 CYNITDKTIQVVTSKLPR 612 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG8272 | NP_001260812.1 | AMN1 | 269..440 | CDD:187754 | 51/209 (24%) |
leucine-rich repeat | 270..295 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 296..319 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 322..346 | CDD:275381 | 8/50 (16%) | ||
leucine-rich repeat | 347..399 | CDD:275381 | 10/51 (20%) | ||
leucine-rich repeat | 400..426 | CDD:275381 | 11/25 (44%) | ||
leucine-rich repeat | 427..535 | CDD:275381 | 10/116 (9%) | ||
AMN1 | 515..>642 | CDD:187754 | 27/102 (26%) | ||
leucine-rich repeat | 536..560 | CDD:275381 | 12/27 (44%) | ||
leucine-rich repeat | 561..586 | CDD:275381 | 6/24 (25%) | ||
leucine-rich repeat | 587..612 | CDD:275381 | 7/24 (29%) | ||
leucine-rich repeat | 613..638 | CDD:275381 | 101/538 (19%) | ||
leucine-rich repeat | 639..663 | CDD:275381 | |||
F-box-like | 12..>44 | CDD:289689 | |||
leucine-rich repeat | 129..166 | CDD:275381 | 8/42 (19%) | ||
leucine-rich repeat | 167..192 | CDD:275381 | 3/24 (13%) | ||
leucine-rich repeat | 193..244 | CDD:275381 | 1/50 (2%) | ||
C2 | <231..274 | CDD:301316 | 6/43 (14%) | ||
leucine-rich repeat | 246..269 | CDD:275381 | 3/22 (14%) | ||
Fbxl16 | XP_038942467.1 | leucine-rich repeat | 195..219 | CDD:275381 | 3/23 (13%) |
AMN1 | 201..422 | CDD:187754 | 67/340 (20%) | ||
leucine-rich repeat | 220..243 | CDD:275381 | 6/22 (27%) | ||
leucine-rich repeat | 244..269 | CDD:275381 | 8/24 (33%) | ||
leucine-rich repeat | 270..321 | CDD:275381 | 8/50 (16%) | ||
leucine-rich repeat | 322..347 | CDD:275381 | 10/51 (20%) | ||
leucine-rich repeat | 348..373 | CDD:275381 | 11/25 (44%) | ||
leucine-rich repeat | 374..407 | CDD:275381 | 10/116 (9%) | ||
leucine-rich repeat | 408..427 | CDD:275381 | 11/22 (50%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_KOG1947 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |