DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8272 and Fbxl7

DIOPT Version :10

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_795933.2 Gene:Fbxl7 / 448987 MGIID:3052506 Length:491 Species:Mus musculus


Alignment Length:486 Identity:106/486 - (21%)
Similarity:189/486 - (38%) Gaps:154/486 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   178 LTDAILMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSSDHVLPSESVL--TFKFILTILN 240
            |.|..::::.||:|:.:.     |..|   .:.||:|.        |..:..|  |.:.....:|
Mouse   117 LPDHSMVQIFSFLPTNQL-----CRCA---RVCRRWYN--------LAWDPRLWRTIRLTGETIN 165

  Fly   241 LQRRTLRVLNFSHTLIGQALLALC----DLNLQLQRLYLAGCRQLNCTTILNFLATQPQLCALDL 301
            :. |.|:||.          ..||    ::.|.|:.:.::|||:|                    
Mouse   166 VD-RALKVLT----------RRLCQDTPNVCLMLETVIVSGCRRL-------------------- 199

  Fly   302 SATMCVNDENLAALVQTNPQLEHLKVNGCLSITNAGAIHLAKLKC--LKSLDISNCDNLTSSGII 364
                  .|..|..:.|..|:|..|:|:||.:|:|.....:..| |  |:.||:|.|..:|...:.
Mouse   200 ------TDRGLYTIAQCCPELRRLEVSGCYNISNEAVFDVVSL-CPNLEHLDVSGCSKVTCISLT 257

  Fly   365 EGIASEENPVI-QELNVSYLQI--C----EECIKAIASNLRCLRSLHLNHCVNGATDEAIQSVIG 422
            ...:.:.:|:. :::::.||.:  |    :|.:..||::...|..|:|..||. .|||.::.::.
Mouse   258 REASIKLSPLHGKQISIRYLDMTDCFVLEDEGLHTIAAHCTQLTHLYLRRCVR-LTDEGLRYLVI 321

  Fly   423 QLRWLRELSLEHCSGLTDAALTGINISKLEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQ 487
            ....::|||:..|..::|..|.  .|:||| ||                                
Mouse   322 YCTSIKELSVSDCRFVSDFGLR--EIAKLE-SR-------------------------------- 351

  Fly   488 SIKISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSL 552
                                                            ||.|::..|.:|:||.:
Mouse   352 ------------------------------------------------LRYLSIAHCGRITDVGI 368

  Fly   553 KYGLKHI-ELRRLMLSNCQQISLLGMEAMASSCPSIEELDLSDCYNITDKTIQVVTSKLPRLKAL 616
            :|..|:. :||.|....|:.|:..|:|.:|.:|..::.||:..|..::|..::.:......||.|
Mouse   369 RYVAKYCSKLRYLNARGCEGITDHGVEYLAKNCTKLKSLDIGKCPLVSDTGLESLALNCFNLKRL 433

  Fly   617 HISGCSQLTEHTLDAIITNCSCLQTLSIYRC 647
            .:..|..:|...|..:..||..||.|::..|
Mouse   434 SLKSCESITGQGLQIVAANCFDLQMLNVQDC 464

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 F-box_SF 11..58 CDD:459239
leucine-rich repeat 129..166 CDD:275381
leucine-rich repeat 167..192 CDD:275381 4/13 (31%)
leucine-rich repeat 193..244 CDD:275381 9/52 (17%)
C2 <231..274 CDD:472691 10/46 (22%)
leucine-rich repeat 246..269 CDD:275381 5/26 (19%)
AMN1 269..440 CDD:187754 43/179 (24%)
leucine-rich repeat 270..295 CDD:275381 5/24 (21%)
leucine-rich repeat 296..319 CDD:275381 3/22 (14%)
leucine-rich repeat 322..346 CDD:275381 8/23 (35%)
leucine-rich repeat 347..399 CDD:275381 13/58 (22%)
leucine-rich repeat 400..426 CDD:275381 8/25 (32%)
leucine-rich repeat 427..535 CDD:275381 12/107 (11%)
AMN1 515..>642 CDD:187754 32/127 (25%)
leucine-rich repeat 536..560 CDD:275381 9/24 (38%)
leucine-rich repeat 561..586 CDD:275381 9/24 (38%)
leucine-rich repeat 587..612 CDD:275381 4/24 (17%)
leucine-rich repeat 613..638 CDD:275381 8/24 (33%)
leucine-rich repeat 639..663 CDD:275381 4/9 (44%)
Fbxl7NP_795933.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..79
F-box_FBXL7 114..157 CDD:438892 12/55 (22%)
leucine-rich repeat 129..151 CDD:275381 7/37 (19%)
leucine-rich repeat 154..187 CDD:275381 8/43 (19%)
AMN1 <185..366 CDD:187754 57/291 (20%)
LRR 1 185..210 8/50 (16%)
leucine-rich repeat 188..213 CDD:275381 8/50 (16%)
LRR 2 211..236 8/24 (33%)
leucine-rich repeat 214..234 CDD:275381 7/19 (37%)
LRR 3 237..262 7/24 (29%)
leucine-rich repeat 240..273 CDD:275381 7/32 (22%)
LRR 4 271..296 6/24 (25%)
leucine-rich repeat 274..299 CDD:275381 6/24 (25%)
AMN1 297..464 CDD:187754 53/250 (21%)
LRR 5 297..322 8/25 (32%)
leucine-rich repeat 300..325 CDD:275381 8/25 (32%)
LRR 6 323..348 7/26 (27%)
leucine-rich repeat 326..351 CDD:275381 10/27 (37%)
LRR 7 349..374 11/105 (10%)
leucine-rich repeat 352..377 CDD:275381 9/24 (38%)
LRR 8 375..400 8/24 (33%)
leucine-rich repeat 378..403 CDD:275381 9/24 (38%)
LRR 9 401..426 5/24 (21%)
leucine-rich repeat 404..429 CDD:275381 4/24 (17%)
LRR 10 427..452 6/24 (25%)
leucine-rich repeat 430..453 CDD:275381 6/22 (27%)
leucine-rich repeat 456..480 CDD:275381 4/9 (44%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.