DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and fbxl2

DIOPT Version :10

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_956400.1 Gene:fbxl2 / 378737 ZFINID:ZDB-GENE-030925-12 Length:432 Species:Danio rerio


Alignment Length:537 Identity:113/537 - (21%)
Similarity:201/537 - (37%) Gaps:174/537 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly   207 NAIHRRFYPATSSSDHV-----LPSESVLTFKFILTILNLQR------------------RTLRV 248
            |.|.:..:...|::|..     ||.|.:|.....|.::.|.|                  :.:.:
Zfish     2 NGITKGRFEVFSNNDEAPINKKLPKELLLRIFSYLDVVTLCRCAQVSKAWNVLALDGSNWQKIDL 66

  Fly   249 LNFSHTLIGQALLALCDLNLQ------LQRLYLAGCRQLNCTTILNFLATQPQLCALDLSATMCV 307
            .||...:.|:.:     .|:.      |::|.|.||                          :.|
Zfish    67 FNFQTDIEGRVV-----ENISKRCGGFLRQLSLRGC--------------------------LSV 100

  Fly   308 NDENLAALVQTNPQLEHLKVNGCLSITNAGAIHLAKLKC--LKSLDISNCDNLTSSGIIEGIASE 370
            .|.::....|....:|||.:|||..||::..|.|:|. |  |:.||:::|.::|:          
Zfish   101 GDASMKTFAQNCRNIEHLNLNGCTKITDSTCISLSKF-CFKLRHLDLTSCVSITN---------- 154

  Fly   371 ENPVIQELNVSYLQICEECIKAIASNLRCLRSLHLNHCVNGATDEAIQSVIGQLRWLRELSLEHC 435
                             ..:||::...|.|.:|:|:.| :..|.:.|:::......||.|.|..|
Zfish   155 -----------------HALKALSEGCRMLENLNLSWC-DQITSDGIEALSRGCTALRALFLRGC 201

  Fly   436 SGLTDAALTGI--NISKLEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQSIKISLRSKAE 498
            :.|.|.||..:  :..:|.....||.:|::                                   
Zfish   202 TQLDDTALKHLQKHCPELMTINMQSCTQIT----------------------------------- 231

  Fly   499 DEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQLRGLRSLN---LRGCNKISDVSL-KYGLKHI 559
                                   :|.|    :...||...|.   :.||:.|:|.|| ..||...
Zfish   232 -----------------------DDGF----VSLCRGCHKLQMVCISGCSNITDASLTALGLNCQ 269

  Fly   560 ELRRLMLSNCQQISLLGMEAMASSCPSIEELDLSDCYNITDKTIQVVTSKLPRLKALHISGCSQL 624
            .|:.|..:.|..::..|...:|.:|..:|::||.:|..:||.|:..::...|||:||.:|.|..:
Zfish   270 RLKILEAARCSHVTDAGFTVLARNCHEMEKMDLEECILVTDNTLVQLSIHCPRLQALSLSHCELI 334

  Fly   625 TEHTLDAI--ITNCSC----LQTLSIYRCRSMYTDLE-ERLSGVKTLRNLNMDNLTSIDNAEFFR 682
            |:   |.|  :::..|    ||.:.:..| .:.||:. |.|...:.|..:.:.:...:..|...|
Zfish   335 TD---DGIRHLSSSVCGQERLQVVELDNC-PLITDITLEHLKNCQRLERIELYDCQQVSRAGIKR 395

  Fly   683 LKKRLD----YXYFAAI 695
            ::..|.    :.|||.:
Zfish   396 IRAHLPEIKVHAYFAPV 412

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 F-box_SF 11..58 CDD:459239
leucine-rich repeat 129..166 CDD:275381
leucine-rich repeat 167..192 CDD:275381
leucine-rich repeat 193..244 CDD:275381 11/59 (19%)
C2 <231..274 CDD:472691 8/66 (12%)
leucine-rich repeat 246..269 CDD:275381 4/22 (18%)
AMN1 269..440 CDD:187754 40/178 (22%)
leucine-rich repeat 270..295 CDD:275381 5/24 (21%)
leucine-rich repeat 296..319 CDD:275381 3/22 (14%)
leucine-rich repeat 322..346 CDD:275381 11/23 (48%)
leucine-rich repeat 347..399 CDD:275381 7/51 (14%)
leucine-rich repeat 400..426 CDD:275381 6/25 (24%)
leucine-rich repeat 427..535 CDD:275381 15/109 (14%)
AMN1 515..>642 CDD:187754 39/136 (29%)
leucine-rich repeat 536..560 CDD:275381 9/27 (33%)
leucine-rich repeat 561..586 CDD:275381 6/24 (25%)
leucine-rich repeat 587..612 CDD:275381 7/24 (29%)
leucine-rich repeat 613..638 CDD:275381 8/26 (31%)
leucine-rich repeat 639..663 CDD:275381 7/24 (29%)
fbxl2NP_956400.1 F-box_FBXL2-like 18..62 CDD:438887 7/43 (16%)
leucine-rich repeat 61..88 CDD:275381 4/31 (13%)
AMN1 63..284 CDD:187754 67/342 (20%)
leucine-rich repeat 89..108 CDD:275381 7/44 (16%)
leucine-rich repeat 115..140 CDD:275381 12/25 (48%)
leucine-rich repeat 141..166 CDD:275381 7/51 (14%)
leucine-rich repeat 167..192 CDD:275381 6/25 (24%)
leucine-rich repeat 193..218 CDD:275381 9/24 (38%)
AMN1 212..390 CDD:187754 49/243 (20%)
leucine-rich repeat 219..244 CDD:275381 8/86 (9%)
leucine-rich repeat 245..270 CDD:275381 9/24 (38%)
leucine-rich repeat 271..296 CDD:275381 6/24 (25%)
leucine-rich repeat 297..322 CDD:275381 7/24 (29%)
leucine-rich repeat 323..351 CDD:275381 9/30 (30%)
leucine-rich repeat 352..376 CDD:275381 7/24 (29%)
leucine-rich repeat 377..402 CDD:275381 4/24 (17%)
Blue background indicates that the domain is not in the aligned region.

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