DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and Fbl6

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_610665.2 Gene:Fbl6 / 36201 FlyBaseID:FBgn0033609 Length:720 Species:Drosophila melanogaster


Alignment Length:424 Identity:98/424 - (23%)
Similarity:153/424 - (36%) Gaps:154/424 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   130 HSLSLKRCLP-LFMSGS------------------------------------FLDSYNNSCPDL 157
            |::..:.||| ||..|.                                    |:|:..::|.||
  Fly   304 HAVDTQGCLPTLFRLGRVCSLWRQVSLRPTLWRTMDLTTWVKEKYRTELKLKWFVDNRCSACTDL 368

  Fly   158 NDLASNLAGIKELTLCENQYLTD--AILMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSS 220
            |              ..|..::|  ..|.:|:|..|:|..|.:||         .:.|     :|
  Fly   369 N--------------VSNWKISDINCFLAKLSSGCPN
LAGITLSG---------WKGF-----TS 405

  Fly   221 DHVLPSESVLTFKFILTILNLQRRTLRVLNF----SHTLIGQALL--ALCDLNLQLQRLYLAGCR 279
            ||       ||: .:..:..|||..|..:|.    |.:.:|...|  ||..:..:|..||||..|
  Fly   406 DH-------LTY-LVDNMHKLQRLDLSSINVEMNASKSAVGVNSLCNALQTMGSRLTHLYLAHNR 462

  Fly   280 QLNCTTILNFLATQ-PQLCALDLS--ATMCVND------------ENLAALVQTN---------- 319
            ......|:..|:|. |.|..||||  .|...:.            :.|..|..||          
  Fly   463 LAGIPQIVGILSTHCPNLTLLDLSNVTTQATSHGVLHIEKLQRGCQKLKVLRVTNSHITPSTASM 527

  Fly   320 ---------PQLEHLKVNGCLSITNAGAI----HLAKL----KCLKSLDISNCDNLTSSGII--- 364
                     |:||.|.|   .::|:...|    ||.::    ..||.||:.||..||...:|   
  Fly   528 QEIMDSPGFPELEELSV---AALTDESRIISDDHLQRILKSSSKLKLLDVRNCTRLTHESLIRLP 589

  Fly   365 ----------------------EGIASEENPVIQELNVSYL---QICEECIKAIASNLRCLRSLH 404
                                  |.|||:....:.||::::.   |..:..::|:|...|.....|
  Fly   590 AWDIKHLFLSGCSVTRDMGSGLELIASKWAHSLIELDLAWANMQQPIDNALRALAEKGRDSPLAH 654

  Fly   405 LNHCVNGATDEAIQSVIGQLRWLRELSLEHCSGL 438
            ||.|.:..:|||::.::...:.:..::|..|.||
  Fly   655 LNLCGSSVSDEAVKEILTNCQNMSSINLASCRGL 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 59/240 (25%)
leucine-rich repeat 270..295 CDD:275381 9/25 (36%)
leucine-rich repeat 296..319 CDD:275381 8/36 (22%)
leucine-rich repeat 322..346 CDD:275381 8/31 (26%)
leucine-rich repeat 347..399 CDD:275381 18/79 (23%)
leucine-rich repeat 400..426 CDD:275381 7/25 (28%)
leucine-rich repeat 427..535 CDD:275381 4/12 (33%)
AMN1 515..>642 CDD:187754
leucine-rich repeat 536..560 CDD:275381
leucine-rich repeat 561..586 CDD:275381
leucine-rich repeat 587..612 CDD:275381
leucine-rich repeat 613..638 CDD:275381
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689
leucine-rich repeat 129..166 CDD:275381 13/72 (18%)
leucine-rich repeat 167..192 CDD:275381 5/26 (19%)
leucine-rich repeat 193..244 CDD:275381 12/50 (24%)
C2 <231..274 CDD:301316 12/48 (25%)
leucine-rich repeat 246..269 CDD:275381 7/28 (25%)
Fbl6NP_610665.2 F-box-like 293..341 CDD:289689 7/36 (19%)
leucine-rich repeat 365..391 CDD:275381 9/39 (23%)
leucine-rich repeat 392..417 CDD:275381 10/46 (22%)
leucine-rich repeat 418..445 CDD:275381 8/26 (31%)
leucine-rich repeat 453..471 CDD:275381 7/17 (41%)
leucine-rich repeat 480..509 CDD:275381 6/28 (21%)
leucine-rich repeat 510..538 CDD:275381 4/27 (15%)
leucine-rich repeat 539..579 CDD:275381 14/42 (33%)
leucine-rich repeat 580..621 CDD:275381 7/40 (18%)
leucine-rich repeat 622..649 CDD:275381 5/26 (19%)
leucine-rich repeat 652..676 CDD:275381 7/23 (30%)
leucine-rich repeat 677..698 CDD:275381 4/12 (33%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.810

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