DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and CG9316

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_610051.2 Gene:CG9316 / 35333 FlyBaseID:FBgn0032878 Length:448 Species:Drosophila melanogaster


Alignment Length:546 Identity:105/546 - (19%)
Similarity:176/546 - (32%) Gaps:198/546 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    72 DLMRCERRFQHFLFEDVTLGQVKELMR--FMG-RTAQSLALDNVDLNDKQFYGMLGVLPHLHSLS 133
            |::|....|...:.:.|.|..|....|  |.| ...|..|||.|.               |.::.
  Fly    48 DIIRLVLEFLPRITDKVLLACVAPKFRAAFEGWARVQRNALDMVS---------------LETVP 97

  Fly   134 LKRCLPLF-MSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAILMR-LTSFMPSLEAI 196
            |.:.:..| ::|.|:......|.                    .|..:::|:. :..:.|:||.|
  Fly    98 LPQLIRFFKVAGPFIRVLQVDCA--------------------SYQKESLLVEFVKEYCPNLEEI 142

  Fly   197 NMSGCHIAFHNAIHRRFYPATSSSDHVLPSESVLTFKFILT-ILNLQRRTLRVLNFSHTLIGQAL 260
            :.|.....||                         ::.|:: :.:|:|.|:..|:....      
  Fly   143 SYSNATDEFH-------------------------YRSIMSKMTHLKRVTIECLDAEDV------ 176

  Fly   261 LALCDLNLQLQRLYLAGCRQLNCTTILNFLATQPQLCALDLSATMCVNDENLAALVQTNPQLEHL 325
                 ||..:|     ..::|....::|...|...||..                    |.|:.|
  Fly   177 -----LNFDMQ-----PNQELEFFELVNGCYTGQNLCGF--------------------PNLKTL 211

  Fly   326 KVNGCLSITNAGAIHLAKLKCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVS-YLQICEEC 389
            .:..|| :.|:....: .||.|.:||:.:|                  ..:.:||| |.:|.|.|
  Fly   212 VLRDCL-LWNSMEFGI-PLKSLHTLDLDDC------------------CFEVMNVSLYQKIAESC 256

  Fly   390 IKAIASNLRCLRSLHLNHCVNGATDEAIQSVIGQLRWLRELSLEHCSGLTDAALTGINISKLEMS 454
            ...:        .|..:.|      :....||..|.     .||.|:..|......:||..|.:.
  Fly   257 TNLV--------ELIFSGC------DTNFEVIANLP-----KLERCTLKTWMTSNELNIGFLTVL 302

  Fly   455 RKQSGSQVSSM---DNFYPPYSNTLAERDSLAGSLQSIKISLRSKAEDEIVRDARRKQAMLAAYE 516
            .::.|::::.:   ..|     |...|.....|.|.|: ..||....|                 
  Fly   303 AEKRGNKLTHLHLSGQF-----NITNEHARCLGQLSSL-TDLRFSNND----------------- 344

  Fly   517 MNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSLKYGLKHIELRRLMLSNCQQISLLGMEAMA 581
              ::.:|.|:..|  .|..|....|..|.::.||                         ||..|.
  Fly   345 --ILDDDHFKFFN--DLSQLERFGLTACGRVMDV-------------------------GMMRML 380

  Fly   582 SSCPSIEELDLSDCYNITDK-TIQVV 606
            ..||.::.:||:||..||:: .||.:
  Fly   381 RKCPQLKVIDLTDCEQITEEFVIQAI 406

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 33/171 (19%)
leucine-rich repeat 270..295 CDD:275381 4/24 (17%)
leucine-rich repeat 296..319 CDD:275381 2/22 (9%)
leucine-rich repeat 322..346 CDD:275381 6/23 (26%)
leucine-rich repeat 347..399 CDD:275381 11/52 (21%)
leucine-rich repeat 400..426 CDD:275381 5/25 (20%)
leucine-rich repeat 427..535 CDD:275381 21/110 (19%)
AMN1 515..>642 CDD:187754 22/93 (24%)
leucine-rich repeat 536..560 CDD:275381 5/23 (22%)
leucine-rich repeat 561..586 CDD:275381 4/24 (17%)
leucine-rich repeat 587..612 CDD:275381 8/21 (38%)
leucine-rich repeat 613..638 CDD:275381
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689
leucine-rich repeat 129..166 CDD:275381 6/37 (16%)
leucine-rich repeat 167..192 CDD:275381 2/25 (8%)
leucine-rich repeat 193..244 CDD:275381 8/51 (16%)
C2 <231..274 CDD:301316 8/43 (19%)
leucine-rich repeat 246..269 CDD:275381 3/22 (14%)
CG9316NP_610051.2 leucine-rich repeat 208..221 CDD:275381 4/13 (31%)
leucine-rich repeat 231..258 CDD:275381 11/44 (25%)
leucine-rich repeat 259..279 CDD:275381 5/38 (13%)
leucine-rich repeat 280..309 CDD:275381 8/28 (29%)
AMN1 310..>411 CDD:187754 31/149 (21%)
leucine-rich repeat 310..334 CDD:275381 5/28 (18%)
leucine-rich repeat 335..359 CDD:275381 7/45 (16%)
leucine-rich repeat 360..385 CDD:275381 9/49 (18%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45457947
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.830

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