DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8272 and fbxl14b

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_001015043.1 Gene:fbxl14b / 324835 ZFINID:ZDB-GENE-030131-3556 Length:400 Species:Danio rerio


Alignment Length:637 Identity:130/637 - (20%)
Similarity:205/637 - (32%) Gaps:268/637 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 EIVLKIFSYLGYSDLQAAGSTCQRWHAALDQAEFNQRTRVCFSKVVLSDQLSPGVDLMRCERRFQ 81
            ||:..|||||...|.......|..|..|            .:.|.|..     ||:.....||..
Zfish    11 EILAMIFSYLDVRDKGRVAQVCTAWRDA------------SYHKSVWR-----GVEAKLHLRRAN 58

  Fly    82 HFLFEDVTLGQVKELMRFMGRTAQSLALDNVDLNDKQFYGMLGVLPHLHSLSLKRCLPLFMSGSF 146
            ..||..:   |.:.:.|                              :..|||:|.|...:.|  
Zfish    59 PSLFPSL---QARGIRR------------------------------VQILSLRRSLSYVIQG-- 88

  Fly   147 LDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAILMRLTSFMPSLEAINMSGCHIAFHNAIHR 211
                                                       ||::|::|:|||:....|.:..
Zfish    89 -------------------------------------------MPNIESLNLSGCYNLTDNGLGH 110

  Fly   212 RFYPATSSSDHVLPSESVLTFKFILTILNLQRRTLRVLNFSHTLIGQALLALCDLNLQLQRLYLA 276
            .|.       ..:||                   |||||                        |:
Zfish   111 AFV-------QEIPS-------------------LRVLN------------------------LS 125

  Fly   277 GCRQLNCTTILNFLATQPQLCALDLSATMCVNDENLAALVQTNPQLEHLKVNGCLSITNAGAIHL 341
            .|:|                          :.|.:|..:.|....||.|::.||.:|||.|.:.:
Zfish   126 LCKQ--------------------------ITDSSLGRIAQYLKNLEVLELGGCSNITNTGLLLI 164

  Fly   342 A-KLKCLKSLDISNCDNLTSSGIIEGIASEENPVIQELNVSYLQICEECIKAIASNLRCLRSLHL 405
            | .|..||||::.:|.:::..||........:.....|::.||.: ::|.|        |..|.|
Zfish   165 AWGLHRLKSLNLRSCRHVSDVGIGHLAGMTRSAAEGCLSLEYLTL-QDCQK--------LTDLSL 220

  Fly   406 NHCVNGATDEAIQSVIGQLRWLRELSLEHCSGLTDAALTGINISKLEMSRKQSGSQVSSMDNFYP 470
            .|...|.|.            |:.|:|..|.|::||.:  |::|.                    
Zfish   221 KHISKGLTK------------LKVLNLSFCGGISDAGM--IHLSH-------------------- 251

  Fly   471 PYSNTLAERDSLAGSLQSIKISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQLRG 535
                                                    |.:.:.:||...|:.....|..| .
Zfish   252 ----------------------------------------MTSLWSLNLRSCDNISDTGIMHL-A 275

  Fly   536 LRSLNLRG-----CNKISDVSLKY---GLKHIELRRLMLSNCQQISLLGMEAMASSCPSIEELDL 592
            :.:|.|.|     |:||.|.||.|   ||  .:|:.|.|.:| .||..|:..|......:..|::
Zfish   276 MGTLRLSGLDVSFCDKIGDQSLAYIAQGL--YQLKSLSLCSC-HISDDGINRMVRQMHELRTLNI 337

  Fly   593 SDCYNITDKTIQVVTSKLPRLKALHISGCSQLTEHTLDAIITNCSCLQTLSI 644
            ..|..||||.::::...|.:|..:.:.||:::|:..|:. ||...||:.|::
Zfish   338 GQCVRITDKGLELIADHLTQLTGIDLYGCTKITKRGLER-ITQLPCLKVLNL 388

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 40/171 (23%)
leucine-rich repeat 270..295 CDD:275381 3/24 (13%)
leucine-rich repeat 296..319 CDD:275381 3/22 (14%)
leucine-rich repeat 322..346 CDD:275381 11/24 (46%)
leucine-rich repeat 347..399 CDD:275381 12/51 (24%)
leucine-rich repeat 400..426 CDD:275381 6/25 (24%)
leucine-rich repeat 427..535 CDD:275381 15/107 (14%)
AMN1 515..>642 CDD:187754 41/134 (31%)
leucine-rich repeat 536..560 CDD:275381 12/31 (39%)
leucine-rich repeat 561..586 CDD:275381 8/24 (33%)
leucine-rich repeat 587..612 CDD:275381 7/24 (29%)
leucine-rich repeat 613..638 CDD:275381 7/24 (29%)
leucine-rich repeat 639..663 CDD:275381 2/6 (33%)
F-box-like 12..>44 CDD:289689 10/26 (38%)
leucine-rich repeat 129..166 CDD:275381 6/36 (17%)
leucine-rich repeat 167..192 CDD:275381 1/24 (4%)
leucine-rich repeat 193..244 CDD:275381 9/50 (18%)
C2 <231..274 CDD:301316 5/42 (12%)
leucine-rich repeat 246..269 CDD:275381 5/22 (23%)
fbxl14bNP_001015043.1 F-box-like 5..46 CDD:403981 13/46 (28%)
AMN1 90..296 CDD:187754 72/365 (20%)
leucine-rich repeat 92..118 CDD:275381 7/32 (22%)
leucine-rich repeat 119..144 CDD:275381 11/74 (15%)
leucine-rich repeat 145..170 CDD:275381 11/24 (46%)
leucine-rich repeat 171..203 CDD:275381 7/31 (23%)
leucine-rich repeat 204..229 CDD:275381 9/33 (27%)
AMN1 230..388 CDD:187754 52/224 (23%)
leucine-rich repeat 230..254 CDD:275381 10/85 (12%)
leucine-rich repeat 255..280 CDD:275381 5/25 (20%)
leucine-rich repeat 281..304 CDD:275381 9/22 (41%)
leucine-rich repeat 307..331 CDD:275381 8/24 (33%)
leucine-rich repeat 332..357 CDD:275381 7/24 (29%)
leucine-rich repeat 358..382 CDD:275381 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13318
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.910

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