DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and Fbxl6

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_038937.2 Gene:Fbxl6 / 30840 MGIID:1354705 Length:535 Species:Mus musculus


Alignment Length:504 Identity:102/504 - (20%)
Similarity:160/504 - (31%) Gaps:172/504 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GLEYGLHRYDDLPLEIVLKIFSYLGYSD-----LQAAGSTCQRWHAALDQAEFNQRTRVCFSKVV 62
            ||:.|..  |.:|||:::.||..|..:.     |..|...|:.||.|.....             
Mouse    98 GLDSGWG--DRIPLEVLVHIFGLLVAAHGPMPFLGRAARVCRHWHEATSHPS------------- 147

  Fly    63 LSDQLSPGVDLMRCERRFQHFLFEDVTLGQVKELMRFMGRTAQSLALDNVDLNDKQFYGMLGVLP 127
                                 |:..|||..     ..:||..:.      :|..::         
Mouse   148 ---------------------LWHTVTLSP-----SLVGRAGKG------NLKGEK--------- 171

  Fly   128 HLHSLSLKRCLPLFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAILMRLTSFMPS 192
                 .|..||...:...|                  :.::.|||...:....::|..::.|.|.
Mouse   172 -----KLLACLEWLVPNRF------------------SQLQSLTLIHWKSQVHSVLELVSKFCPR 213

  Fly   193 LEAINMSGCHIAFHNA---IHRRFYPATSSSDHVLPSESVLTFKFILTILNLQRRTLRVLNFSHT 254
            |..:.:|.||......   :.|......|...|....||.....|:....:..|:.....:...|
Mouse   214 LTFLKLSDCHTVTAETLVMLARACCQLHSLDLHHSMVESTAVVSFLEEAGSRMRKLWLTYSSQTT 278

  Fly   255 LIGQALLALCDLNLQLQRLYLA-----------------GCRQLNCTTILNFLATQ--------- 293
            .|..|||..|...||:.::...                 ||.||....:||.:...         
Mouse   279 AILGALLDNCCPQLQVLQVSTGMNCNNTPLQLPVEALQKGCPQLQVLRLLNLIWLPKPCGRGVPQ 343

  Fly   294 ----PQLCALDLSATMC--VNDENLAALVQTNPQLEHLKVNGCLSITNAGAIHLAKLKCLKSLDI 352
                |.|..|.|:.:.|  |::|.|..|:..:|:|..|.:.||..:|.:|..||.          
Mouse   344 GPGFPSLEELCLAGSTCNFVSNEVLGRLLHRSPKLRMLDLRGCARVTPSGLCHLP---------- 398

  Fly   353 SNCDNLTS-----SGIIEG--IASEENPV--------IQELNVSYLQICEECIK----------- 391
              |..|..     .||.:|  :|.:.:|:        ::||:.|.....|:.::           
Mouse   399 --CQELEQLYLGLYGISDGLTLAKDGSPLLTRKWYHTLRELDFSGQGFSEKDLEQALAVFSGTPG 461

  Fly   392 ----AIAS-NLRCLRSLHLNHCVNGATDEAIQSVIGQLRWLRELSLEHC 435
                |:.| |||..|          .|...:.|||.....|..|:||.|
Mouse   462 GLHPALCSLNLRGTR----------VTPSTVSSVISGCPGLLYLNLESC 500

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 51/230 (22%)
leucine-rich repeat 270..295 CDD:275381 6/54 (11%)
leucine-rich repeat 296..319 CDD:275381 8/24 (33%)
leucine-rich repeat 322..346 CDD:275381 8/23 (35%)
leucine-rich repeat 347..399 CDD:275381 15/82 (18%)
leucine-rich repeat 400..426 CDD:275381 5/25 (20%)
leucine-rich repeat 427..535 CDD:275381 5/9 (56%)
AMN1 515..>642 CDD:187754
leucine-rich repeat 536..560 CDD:275381
leucine-rich repeat 561..586 CDD:275381
leucine-rich repeat 587..612 CDD:275381
leucine-rich repeat 613..638 CDD:275381
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689 12/36 (33%)
leucine-rich repeat 129..166 CDD:275381 4/36 (11%)
leucine-rich repeat 167..192 CDD:275381 5/24 (21%)
leucine-rich repeat 193..244 CDD:275381 10/53 (19%)
C2 <231..274 CDD:301316 10/42 (24%)
leucine-rich repeat 246..269 CDD:275381 6/22 (27%)
Fbxl6NP_038937.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..25