DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG8272 and FBXL6

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_036294.2 Gene:FBXL6 / 26233 HGNCID:13603 Length:539 Species:Homo sapiens


Alignment Length:497 Identity:112/497 - (22%)
Similarity:170/497 - (34%) Gaps:174/497 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DDLPLEIVLKIFSYLGYSD-----LQAAGSTCQRWHAALDQAEFNQRTRVCFSKVVLSDQLSPGV 71
            |.:||||:::||..|..:|     |..|...|:||..|..|..                      
Human   113 DRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPA---------------------- 155

  Fly    72 DLMRCERRFQHFLFEDVTLGQVKELMRFMGRTAQSLALDNVDLNDKQFYGMLGVLPHLHSL-SLK 135
                        |:..|||..     ..:||.|:.                 ||......| ||:
Human   156 ------------LWHTVTLSS-----PLVGRPAKG-----------------GVKAEKKLLASLE 186

  Fly   136 RCLPLFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAILMRLTSFMPSLEAINMSG 200
            ..:|                      :..:.::.|||...:.....:|..:....|.|..:.:||
Human   187 WLMP----------------------NRFSQLQRLTLIHWKSQVHPVLKLVGECCPRLTFLKLSG 229

  Fly   201 CHIAFHNA----------IHRRFYPATSSSDHVLPSESVLTFKFILTILNLQRRTLRVLNFSHT- 254
            ||....:|          :|     :......::.|.:|::|   |.....:.|.|.:...|.| 
Human   230 CHGVTADALVMLAKACCQLH-----SLDLQHSMVESTAVVSF---LEEAGSRMRKLWLTYSSQTT 286

  Fly   255 -LIGQALLALCDLNLQ---------------------LQRLYLAGCRQLNCTTILNFLATQ---- 293
             ::| |||..|...||                     ||:    ||.||....:||.:...    
Human   287 AILG-ALLGSCCPQLQVLEVSTGINRNSIPLQLPVEALQK----GCPQLQVLRLLNLMWLPKPPG 346

  Fly   294 ---------PQLCALDLSATMC--VNDENLAALVQTNPQLEHLKVNGCLSITNAGAIHLAKLKC- 346
                     |.|..|.|:::.|  |::|.|..|:..:|.|..|.:.||..||.||   |..|.| 
Human   347 RGVAPGPGFPSLEELCLASSTCNFVSNEVLGRLLHGSPNLRLLDLRGCARITPAG---LQDLPCR 408

  Fly   347 -LKSLDI---SNCDNLTSSGIIEGIASEENP--------VIQELNVSYLQICEECI-KAIASNLR 398
             |:.|.:   ...|.||       :|.|.:|        .::||::|.....|:.: :|:|:.|.
Human   409 ELEQLHLGLYGTSDRLT-------LAKEGSPFLTQKWCHTLRELDLSGQGFSEKDLEQALAAFLS 466

  Fly   399 CLRSLH-----LNHCVNGATDEAIQSVIGQLRWLRELSLEHC 435
            .....|     ||......|...:.|||.....|..|:||.|
Human   467 TPGGSHPALCSLNLRGTRVTPSTVSSVISGCPGLLYLNLESC 508

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 57/222 (26%)
leucine-rich repeat 270..295 CDD:275381 8/37 (22%)
leucine-rich repeat 296..319 CDD:275381 8/24 (33%)
leucine-rich repeat 322..346 CDD:275381 10/23 (43%)
leucine-rich repeat 347..399 CDD:275381 15/63 (24%)
leucine-rich repeat 400..426 CDD:275381 7/30 (23%)
leucine-rich repeat 427..535 CDD:275381 5/9 (56%)
AMN1 515..>642 CDD:187754
leucine-rich repeat 536..560 CDD:275381
leucine-rich repeat 561..586 CDD:275381
leucine-rich repeat 587..612 CDD:275381
leucine-rich repeat 613..638 CDD:275381
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689 14/36 (39%)
leucine-rich repeat 129..166 CDD:275381 4/37 (11%)
leucine-rich repeat 167..192 CDD:275381 4/24 (17%)
leucine-rich repeat 193..244 CDD:275381 11/60 (18%)
C2 <231..274 CDD:301316 15/65 (23%)
leucine-rich repeat 246..269 CDD:275381 8/24 (33%)
FBXL6NP_036294.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 49..111
F-box-like 113..163 CDD:289689 19/83 (23%)
LRR 1 177..203 7/47 (15%)
AMN1 185..398 CDD:187754 51/247 (21%)
leucine-rich repeat 196..221 CDD:275381 4/24 (17%)
LRR 2 204..229 3/24 (13%)
leucine-rich repeat 222..247 CDD:275381 6/24 (25%)
LRR 3 230..255 4/29 (14%)
leucine-rich repeat 248..299 CDD:275381 14/59 (24%)
LRR 4 281..307 9/26 (35%)
leucine-rich repeat 300..329 CDD:275381 6/32 (19%)
LRR 5 312..337 6/28 (21%)
leucine-rich repeat 330..357 CDD:275381 3/26 (12%)
LRR 6 341..365 4/23 (17%)
AMN1 <357..508 CDD:187754 46/160 (29%)
leucine-rich repeat 358..385 CDD:275381 8/26 (31%)
LRR 7 368..393 8/24 (33%)
leucine-rich repeat 386..409 CDD:275381 11/25 (44%)
LRR 8 394..419 10/27 (37%)
LRR 9 423..449 7/32 (22%)
leucine-rich repeat 442..474 CDD:275381 8/31 (26%)
LRR 10 453..481 7/27 (26%)
leucine-rich repeat 475..499 CDD:275381 6/23 (26%)
LRR 11 482..507 7/24 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165152985
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
32.740

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