DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and FBXL3

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_036290.1 Gene:FBXL3 / 26224 HGNCID:13599 Length:428 Species:Homo sapiens


Alignment Length:491 Identity:95/491 - (19%)
Similarity:158/491 - (32%) Gaps:157/491 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YDDLPLEIVLKIFSYLGYSDLQAAGSTCQRWHAALDQAEFNQRTRVCFSKVVLSDQLSPGVDLMR 75
            :.:|..:|:|::|.||...|...|...|:.|                       :|:....||.|
Human    36 WGNLLQDIILQVFKYLPLLDRAHASQVCRNW-----------------------NQVFHMPDLWR 77

  Fly    76 CERRFQHFLFEDVTLGQVKELMRFMGRTAQSLALDNVDLNDKQFYGMLGVLPHLHSLSLKRCLPL 140
            |   |:..|.:..|        .::..|...|....:..:..          ||..:|.|     
Human    78 C---FEFELNQPAT--------SYLKATHPELIKQIIKRHSN----------HLQYVSFK----- 116

  Fly   141 FMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCENQYLTDAILMRLTSFMPSLEAINMSGCHIAF 205
                  :||...|.....|:.|.|......||       ..|.....|||...::..:|...:.|
Human   117 ------VDSSKESAEAACDILSQLVNCSLKTL-------GLISTARPSFMDLPKSHFISALTVVF 168

  Fly   206 HNAIHRRFYPATSSSDHVLPSESVLTFKFILTILNLQRRTLRVLNFSHTLIGQALLALCDLNLQL 270
            .|                  |:|:.:.|...|.::.....:.|.|.|.|               |
Human   169 VN------------------SKSLSSLKIDDTPVDDPSLKVLVANNSDT---------------L 200

  Fly   271 QRLYLAGCRQLNCTTILNFLATQPQLCALDLSATMC------------VNDENLAAL-VQTNPQL 322
            :.|.::.|..::...|         ||..|    .|            ::||.|.|| .:.:.:|
Human   201 KLLKMSSCPHVSPAGI---------LCVAD----QCHGLRELALNYHLLSDELLLALSSEKHVRL 252

  Fly   323 EHLKVNGCLSITNAGAIHLAKLKCLKSLDISNCD---------NLTSSGIIEGIASEENPVIQ-E 377
            |||:::  :...|.|..|      ..::..|:.|         ||.....:  ...|.:|..: |
Human   253 EHLRID--VVSENPGQTH------FHTIQKSSWDAFIRHSPKVNLVMYFFL--YEEEFDPFFRYE 307

  Fly   378 LNVSYLQICEECIKAIAS--NLRCLRSLHLNHCVNG--ATDEAIQSVIGQLRWLRELSLEHCSGL 438
            :..::|.......|.:..  .:.|.|.:.|..|.||  ..||.:..:..:.:.|..:.|..|.  
Human   308 IPATHLYFGRSVSKDVLGRVGMTCPRLVELVVCANGLRPLDEELIRIAERCKNLSAIGLGECE-- 370

  Fly   439 TDAALTGINISKLEMSRKQSG---SQVSSMDNFYPP 471
                   ::.|......|..|   ||:|.|:....|
Human   371 -------VSCSAFVEFVKMCGGRLSQLSIMEEVLIP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 40/197 (20%)
leucine-rich repeat 270..295 CDD:275381 4/24 (17%)
leucine-rich repeat 296..319 CDD:275381 9/35 (26%)
leucine-rich repeat 322..346 CDD:275381 7/23 (30%)
leucine-rich repeat 347..399 CDD:275381 9/63 (14%)
leucine-rich repeat 400..426 CDD:275381 7/27 (26%)
leucine-rich repeat 427..535 CDD:275381 11/48 (23%)
AMN1 515..>642 CDD:187754
leucine-rich repeat 536..560 CDD:275381
leucine-rich repeat 561..586 CDD:275381
leucine-rich repeat 587..612 CDD:275381
leucine-rich repeat 613..638 CDD:275381
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689 10/31 (32%)
leucine-rich repeat 129..166 CDD:275381 9/36 (25%)
leucine-rich repeat 167..192 CDD:275381 6/24 (25%)
leucine-rich repeat 193..244 CDD:275381 7/50 (14%)
C2 <231..274 CDD:301316 7/42 (17%)
leucine-rich repeat 246..269 CDD:275381 4/22 (18%)
FBXL3NP_036290.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..27
F-box-like 36..77 CDD:403981 13/63 (21%)
LRR 1 119..146 7/33 (21%)
leucine-rich repeat 174..199 CDD:275381 5/24 (21%)
LRR 2 181..207 7/40 (18%)
leucine-rich repeat 200..225 CDD:275381 8/37 (22%)
LRR 3 208..233 6/37 (16%)
LRR 4 234..259 9/26 (35%)
leucine-rich repeat 252..286 CDD:275381 9/41 (22%)
leucine-rich repeat 287..333 CDD:275381 8/47 (17%)
LRR 5 316..341 4/24 (17%)
leucine-rich repeat 334..360 CDD:275381 6/25 (24%)
LRR 6 343..368 5/24 (21%)
leucine-rich repeat 361..383 CDD:275381 5/30 (17%)
LRR 7 369..394 7/33 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165153015
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.830

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