DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG8272 and FBXL16

DIOPT Version :9

Sequence 1:NP_001260812.1 Gene:CG8272 / 35875 FlyBaseID:FBgn0033337 Length:710 Species:Drosophila melanogaster
Sequence 2:NP_699181.2 Gene:FBXL16 / 146330 HGNCID:14150 Length:479 Species:Homo sapiens


Alignment Length:519 Identity:104/519 - (20%)
Similarity:164/519 - (31%) Gaps:210/519 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 GVLPHLHSLSLKRCLP------LFMSGSFLDSYNNSCPDLNDLASNLAGIKELTLCE--NQY--- 177
            |:.|.||:..|...||      :.:.|.....:...|         |.|:.:|.:||  :.|   
Human   136 GLTPVLHAKELYNVLPGGEKEFVNLQGFAARGFEGFC---------LVGVSDLDICEFIDNYALS 191

  Fly   178 -------------LTDAILMRLTSFMPSLEAINMSGCHIAFHNAIHRRFYPATSSSDHVLPSESV 229
                         :|||.|..:...|..:..:.:|||:                           
Human   192 KKGVKAMSLKRSTITDAGLEVMLEQMQGVVRLELSGCN--------------------------- 229

  Fly   230 LTFKFILTILNLQRRTLRVLNFSHTLIGQALLALCDLNLQLQRLYLAGCRQLNCTTILNFLATQP 294
                                :|:...:..:|.|      ::..|.::.|..:....|.......|
Human   230 --------------------DFTEAGLWSSLSA------RITSLSVSDCINVADDAIAAISQLLP 268

  Fly   295 QLCALDLSATMCVNDENLAALVQTNPQLEH-LKVNGCLSITNAGAIHLA-KLKCLKSLDISNCDN 357
            .|..|.|.| ..|.|..||..........| |::..|..|||.|.:::. .|..|.:|.:|.|..
Human   269 NLAELSLQA-YHVTDTALAYFTARQGHSTHTLRLLSCWEITNHGVVNVVHSLPNLTALSLSGCSK 332

  Fly   358 LTSSGIIEGIASEENPVIQELNVSYLQICEECIKAIASNLRCLRSLHLNHCVNGATDEAIQSVIG 422
            :|..|                           ::.:|.|||.||||.|:.|.. .||.|::.|..
Human   333 VTDDG---------------------------VELVAENLRKLRSLDLSWCPR-ITDMALEYVAC 369

  Fly   423 QLRWLRELSLEHCSGLTDAALTGINISKLEMSRKQSGSQVSSMDNFYPPYSNTLAERDSLAGSLQ 487
            .|..|.||.|:.|..:||..|:                           |.:|::          
Human   370 DLHRLEELVLDRCVRITDTGLS---------------------------YLSTMS---------- 397

  Fly   488 SIKISLRSKAEDEIVRDARRKQAMLAAYEMNLIREDDFEGHNIQQLRGLRSLNLRGCNKISDVSL 552
                                                           .||||.||.|.::.|   
Human   398 -----------------------------------------------SLRSLYLRWCCQVQD--- 412

  Fly   553 KYGLKHI----ELRRLMLSNCQQISLLGMEAMASSCPSIEELDLSDCYNITDKTIQVVTSKLPR 612
             :||||:    .||.|.|:.|..::..|:..:. ....:|||:|::|...|.:..:..:..|||
Human   413 -FGLKHLLALGSLRLLSLAGCPLLTTTGLSGLV-QLQELEELELTNCPGATPELFKYFSQHLPR 474

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG8272NP_001260812.1 AMN1 269..440 CDD:187754 46/172 (27%)
leucine-rich repeat 270..295 CDD:275381 3/24 (13%)
leucine-rich repeat 296..319 CDD:275381 8/22 (36%)
leucine-rich repeat 322..346 CDD:275381 8/25 (32%)
leucine-rich repeat 347..399 CDD:275381 9/51 (18%)
leucine-rich repeat 400..426 CDD:275381 11/25 (44%)
leucine-rich repeat 427..535 CDD:275381 10/107 (9%)
AMN1 515..>642 CDD:187754 27/102 (26%)
leucine-rich repeat 536..560 CDD:275381 12/27 (44%)
leucine-rich repeat 561..586 CDD:275381 6/24 (25%)
leucine-rich repeat 587..612 CDD:275381 7/24 (29%)
leucine-rich repeat 613..638 CDD:275381 104/519 (20%)
leucine-rich repeat 639..663 CDD:275381
F-box-like 12..>44 CDD:289689
leucine-rich repeat 129..166 CDD:275381 8/42 (19%)
leucine-rich repeat 167..192 CDD:275381 9/42 (21%)
leucine-rich repeat 193..244 CDD:275381 3/50 (6%)
C2 <231..274 CDD:301316 3/42 (7%)
leucine-rich repeat 246..269 CDD:275381 3/22 (14%)
FBXL16NP_699181.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..62
AMN1 201..413 CDD:332986 70/381 (18%)
leucine-rich repeat 220..243 CDD:275381 6/75 (8%)
leucine-rich repeat 244..269 CDD:275381 3/24 (13%)
LRR 1 244..266 3/21 (14%)
LRR 2 267..290 9/23 (39%)
leucine-rich repeat 270..295 CDD:275381 8/25 (32%)
leucine-rich repeat 296..321 CDD:275381 8/24 (33%)
LRR 3 319..343 7/50 (14%)
leucine-rich repeat 322..347 CDD:275381 9/51 (18%)
LRR 4 345..369 12/24 (50%)
leucine-rich repeat 348..373 CDD:275381 11/25 (44%)
LRR 5 371..395 10/50 (20%)
leucine-rich repeat 374..398 CDD:275381 10/107 (9%)
LRR 6 396..420 12/84 (14%)
LRR 7 446..470 6/23 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1947
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
21.810

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