DRSC/TRiP Functional Genomics Resources

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Protein Alignment stmA and EFR3

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_013939.1 Gene:EFR3 / 855252 SGDID:S000004825 Length:782 Species:Saccharomyces cerevisiae


Alignment Length:839 Identity:158/839 - (18%)
Similarity:287/839 - (34%) Gaps:235/839 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 PRYKRLVDNIFPV------NPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKRYK 97
            |::::||:..:|.      .|:    .|....|.:|..|...||:::..||.:::|.|:|.:|..
Yeast    11 PKHQKLVNQCYPTGRTTDKKPK----SSETSYLLYYVNSRRSKLEKVSTYLIKRSTSDLNHRRIG 71

  Fly    98 LAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSN-------------------PNLKI 143
            ...:.::.|:.::  .|.:..||:||:.||.::.|:|.::|                   .||..
Yeast    72 NIAVTLDLMNKIV--LHCKENLNVFVKDFLYIMNKVLSNNNFNNDVSVVELIELAFSSICQNLDD 134

  Fly   144 MATNSFVKFANINEDTPSYHRRYDFFISKFSSMCHSDAASMRDSLRLAGIKGLQG--VIRKTVSD 206
            :..|..::|..:      |....|.|....:...|:|...::..:.::....:..  .:...||.
Yeast   135 VLCNGDMEFVQL------YQNFVDLFFKIVTERIHNDDMLLKCCIDISNTNSVSSNPQLNHFVSK 193

  Fly   207 DLVENIWEAEHMEKIVPSLLFNMQFCVNVMFVKKNLLASGDLT-----PVEDATNVTPPALAEEV 266
            .:...|.:.:.......:|........|   :.|.|..:...|     ..||..:::..||....
Yeast   194 SVAYTISKFQERNPKFKTLSLEAALESN---LGKRLSRTQTRTIGLDKAAEDNHDLSVKALQSYF 255

  Fly   267 LRELVGRASFGHIRSVLKPLLTHLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDN 331
            ......:.:.. ||::|:.|.:        .||.   .....|...|..|..|.|:..|::.|.:
Yeast   256 NTTETDKLNLS-IRTLLRCLQS--------TPNK---ELLEFVCNGIPVQLRYIVILLLVRQLSD 308

  Fly   332 NFKS-----SPKTRTSLAVVLSKIIAIAAGESVGPSALDIINNLLTHLRTSVSTTSEITPE---- 387
            ..|:     |.|..:||.|....|        ||.|.|||:..|| :.:...:|..|:..:    
Yeast   309 KDKNVNPIVSLKLMSSLLVSDVSI--------VGLSVLDIMRKLL-NFQLKNATNKEVVAQSCIT 364

  Fly   388 ------ESQYQEALINALGE-----------------------FANHHPDYQKIEIMLFIMNTVP 423
                  ::.|.|...:.|.|                       |...|.....|.:.|||     
Yeast   365 MTDLNHKTYYAEQTSDMLYELLLKLKSDTVKDVEKNAVVEDIDFLVEHITQPSISLELFI----- 424

  Fly   424 DLSKKSKGDQM-LQNILLKSLLKVGTQY-STVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQIL 486
            ||:...|...: |.||       |.|:. |::.|.|.:  |.|:.|         .:..|..:::
Yeast   425 DLAHYMKNHIICLFNI-------VETEVPSSILFSKLY--SLLREL---------DSHGVQKEMM 471

  Fly   487 QALLDRHQNEQVLS-------SVSVKPYPALSQEPPSRSDIIFTHKYGANIMQALIDSMALSDRV 544
            :.:.|::....:||       :||...|...|.           |...||.::       |:|..
Yeast   472 EEIFDKYGKMALLSGLNYFLENVSEPEYTYYSY-----------HLQAANFLK-------LNDYK 518

  Fly   545 DALTSSFNTAALLIVEMSCNETVQEFLLFILGIQQVACTVDTLGNVHKCSLHAISIGLLVLISRV 609
            ........|..|.        |.::.|.:.         .||..|.:.      ..|..:|:|| 
Yeast   519 SQTEYKMQTRTLF--------TKEDLLSYY---------SDTGSNKYS------KKGAQILLSR- 559

  Fly   610 SGINNLLEYAQKIVDARREEASHFLPPLLEPKKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQ 674
               :|.:..:..:.|::.....      ||.|.:....|:                         
Yeast   560 ---DNQISTSDLLSDSQVRTTP------LEYKNVPNAIFS------------------------- 590

  Fly   675 RLNTGAPYSLNQTDHPGHRHSWVESVSNQLTQRNSSADLTVYNGDVDSVSSSPGVCKKLLAPEFN 739
              |..|.|..|  |....::.:..|:.:.:.:.|.:         |.|.:::.|...:.:|.:..
Yeast   591 --NGKAVYDNN--DFAAKQNKFDNSIDDNIEEANDT---------VISDANAKGSIYRFVAEDAR 642

  Fly   740 FDAMKRALAEPTEAAKREQRERQMQIVRTFREGEFDDLMRRTEPKHDLIQN---RLNEL 795
            .....||.|......|:...|:.:. ....|:|.|    |.::.....:.|   .||||
Yeast   643 SWKTMRATAPKVSDLKKTMNEKNIP-NNMKRDGSF----RGSQSVKSRVTNITFLLNEL 696



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157344679
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1877
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2505
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.860

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