DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and AT1G05960

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001154308.1 Gene:AT1G05960 / 837106 AraportID:AT1G05960 Length:1003 Species:Arabidopsis thaliana


Alignment Length:996 Identity:207/996 - (20%)
Similarity:364/996 - (36%) Gaps:292/996 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PSC--CCGCCSALR-------PRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEY 82
            |:|  .|..|.:||       .|||:::..|||.|.|.......:.||..|:..:|.::.:|.||
plant    10 PACGNLCFFCPSLRARSRHPVKRYKKMLAEIFPRNQEAEPNDRKIGKLCEYASRNPLRIPKITEY 74

  Fly    83 LYQKATKDINRKRYKLAEIAMEAMDLLLQACHAQTT-------------------LNLFVESFLR 128
            |.||..|::........::.:.....||.:|..|.:                   |.||..|.|.
plant    75 LEQKCYKELRNGNIGSVKVVLCIYKKLLSSCKEQISSEIMLTFFFLVARSFTFEFLPLFSCSLLS 139

  Fly   129 MVQKLLEDS-NPNLKIMATNSFVKFANINEDTPSYHRRYDFFISKFSSMCH---SDAASMRDSLR 189
            :|:.|||.: ...::|:..|:.|.|.:: :...|:....:..|.|...:..   .|..|::  ||
plant   140 IVRTLLEQTKEEEVQILGCNTLVDFISL-QTVNSHMFNLEGLIPKLCQLAQEMGDDERSLQ--LR 201

  Fly   190 LAGIKGLQGVI-----RKTVSDDL-------VENIWEAE-------HMEKI----VPSLLFNMQF 231
            .||::.|..::     ...:|.||       :||..:.|       .:::|    :|::...:.|
plant   202 SAGMQALAFMVSFIGEHSQLSMDLDMIISVILENYMDLEKGQEDTKEVDQISDTKIPNMTKKVSF 266

  Fly   232 CVNVMFVKKNLLASGDLTPVED------ATNVTPPALAEEVLRELVGRASFGHIRSVLKPLLTHL 290
            ..|.:...|  |.:.|::....      ..|:.  .||:|...          :|.||:||||..
plant   267 KPNPVTDYK--LENMDISKSPSYWSMVCLCNIA--KLAKETTT----------VRRVLEPLLTAF 317

  Fly   291 DRHELWVPNTFAIHTFRIVMISIQPQYS------YTVVETLMQHLDNNFKSSPKTRTSLAVVLSK 349
            |..:.|.|......:   |::.:|.:..      :.:|.:|::|||:......:......|.::.
plant   318 DSGDYWSPQKGVASS---VLLFLQSRLEESGENCHVLVSSLIKHLDHKNVIKQQGLQINMVNVAT 379

  Fly   350 IIAIAAGESVGPSALDIINNLLTHLRTSVSTTSEI------TPEESQYQEALINALGEFANHHPD 408
            .:|:.|.:....:...:|.:|:.|||..:...:|.      |.:.|..|.||.|.:.|.:|...|
plant   380 CLALHAKQQASGAMTAVIADLIKHLRKCLQNAAESDVSVDKTKQNSDLQHALENCIAELSNKVGD 444

  Fly   409 YQKI-EIMLFIMNTVPDLSKKSKGDQMLQNILLKSLLKVGTQYSTVS----FEKAFP-ASFLQPL 467
            ...| ::...::.|:       ..:.:|......::|:.....|.|.    .:|.|| |.|.|.|
plant   445 AGPILDMFAVVLETI-------STNVVLSRTTASAILRAAHIVSVVPNVSYHKKVFPDALFHQLL 502

  Fly   468 LKMARA-------PHNPTRMVVMQILQ-ALLDRHQ--NEQVLSSVSV--------------KPYP 508
            |.|:.|       .||...:|::..|: ...|:|:  :|.|..|:||              |...
plant   503 LAMSHADCTTRVEAHNIFSVVLLGTLRLPWSDQHKETSEAVSGSLSVDGICTVRNQEEEKEKVEK 567

  Fly   509 ALSQEPPSRSDIIFTHKYGANIMQAL----IDSMA-LSDRVDALTS--------SFNTAALLIVE 560
            :|:.|.....:.|..........|.|    :||:. |.|.:.:|.|        :...::|.|..
plant   568 SLNSELCKDVNHISRPSVSGQTSQQLSCQSLDSLKDLDDGIKSLCSLRLSSHQVNMLLSSLWIQA 632

  Fly   561 MSCNETVQEF----------LLFILG--------IQ--QVACTVDTL------GNVH--KCSLHA 597
            .|.:.|.:.|          |||.|.        :|  |:|.::..|      |..|  :.|:..
plant   633 TSTDNTPENFEAMASTYQITLLFSLAKRSNHMALVQCFQLAFSLRNLSLNQDGGMQHSRRRSIFT 697

  Fly   598 ISIGLLVLISRVSGINNLLEYAQK----------------------------------------- 621
            .:..:|:..:::|.|..|:...::                                         
plant   698 FASYMLIFGAKISNILELVPIIKESLTAQMVDPYLVLEGDIRLRAVCSGFPQEETYGSDKDDSAA 762

  Fly   622 ------IVDARREE---ASHFLPPL--------LEPKKLAGKTFNLQLPHLAIDKLALGECLQNA 669
                  :.|.||.:   .:||...|        |..:|.....|:|...|      :||..|.. 
plant   763 LNSSVIVTDDRRLKEIVITHFTSKLQTLSEEEQLNLRKEIQSDFSLDDAH------SLGGQLFT- 820

  Fly   670 GMDAQRLNTGAPYS-LNQTDHP-------------------------GHRHSWVESVSNQLTQRN 708
                   :|..|.| ||||:.|                         |||.|        |:...
plant   821 -------DTPGPSSPLNQTELPAFEEVELSDIAAFEGISPGASGSQSGHRTS--------LSTNT 870

  Fly   709 SSADLTVYNGDVDSVSSSPGVCKKLLAPEFNFDAMKRALAEPTEAAKREQRERQMQIVRTFR--- 770
            :..|:...|..::|||.:......|  |..:.......:....||.. ..::::|.::|:|:   
plant   871 NPVDVLSVNELLESVSETARQVASL--PVSSIPVPYDQMMNQCEALV-TGKQQKMSVLRSFKPQA 932

  Fly   771 -------EGEFDD--LMRRTE 782
                   :.|.|:  |::.||
plant   933 TKAITSEDNEKDEQYLLKETE 953



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 104 1.000 Domainoid score I2223
eggNOG 1 0.900 - - E1_KOG1877
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 104 1.000 Inparanoid score I2133
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - otm2825
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.860

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