DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and Efr3b

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_001075952.1 Gene:Efr3b / 668212 MGIID:2444851 Length:817 Species:Mus musculus


Alignment Length:858 Identity:333/858 - (38%)
Similarity:501/858 - (58%) Gaps:99/858 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95
            ||||.|||||||||||||||.:|||||||:||||||||:||:|:||||||.||.::..:|:.|.|
Mouse     5 CGCCGALRPRYKRLVDNIFPEDPEDGLVKTNMEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHR 69

  Fly    96 YKLAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTP 160
            |....|||||:|.||.|||.| ::||||||||:||.||||...|||:|:.||||||||||.||||
Mouse    70 YGYVCIAMEALDQLLMACHCQ-SINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTP 133

  Fly   161 SYHRRYDFFISKFSSMCHS--DAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVP 223
            ||||.||||:|:||.||||  |...::..:|::||||||||:||||:|:|..|||:.:||:||||
Mouse   134 SYHRSYDFFVSRFSEMCHSSHDDLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDKIVP 198

  Fly   224 SLLFNMQFCVNVMFVKKNLLASGDLTPVEDATNVTP------------PA-LAEEVLRELVGRAS 275
            |||||:|.                   ||:|.:.:|            || |||..||||:|||:
Mouse   199 SLLFNLQH-------------------VEEAESRSPSPLQAPEKEKENPAELAERCLRELLGRAA 244

  Fly   276 FGHIRSVLKPLLTHLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTR 340
            ||:|::.:||:|.|||.|.||.|..||...|:|:|.|||||:|:.|::.|:.|||.|.:|:...|
Mouse   245 FGNIKNAIKPVLIHLDNHSLWEPKVFATRCFKIIMYSIQPQHSHLVIQQLLSHLDANSRSAATVR 309

  Fly   341 TSLAVVLSKIIAIAAGESVGPSALDIINNLLTHLRTS------------VSTTSEITP--EESQY 391
            ..:..|||:...|||..||||:.|::.|.||..||.|            ||..|:|..  ||..:
Mouse   310 AGIVEVLSEAAIIAATGSVGPTVLEMFNTLLRQLRLSIDYALTGSYDGAVSLGSKIIKEHEECMF 374

  Fly   392 QEALINALGEFANHHPDYQKIEIMLFIMNTVP--------DLSKKSKG-DQMLQNILLKSLLKVG 447
            |||:|..:|.||:..|.||:.|::||||:.||        :..:..:. :::.|.:||||||:|.
Mouse   375 QEAVIKTIGSFASTLPTYQRSEVILFIMSKVPLPSVHHPVETGRTGENRNRLTQIMLLKSLLQVS 439

  Fly   448 TQYSTVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQILQALLDRHQNEQVLSSVS-------VK 505
            |.:...:...|.|::||..||..|.......|:.|::||.:.:|||.|....|::|       :|
Mouse   440 TGFQCNNMMSALPSNFLDRLLSTALMEDAEIRLFVLEILISFIDRHGNRHKFSTISTLGDISVLK 504

  Fly   506 PYPALSQEPPSRSDIIFTHKYGANIMQALI----DSMALSDRVDALTSSFNTAALLIVEMSCNET 566
                |..:..||.|.:|..|:...:.:.:.    :...:....:||   :...||:.:|::..|.
Mouse   505 ----LKVDKCSRQDTVFMKKHSQQLYRHIYLSCKEETNIQKHYEAL---YGLLALISIELANEEV 562

  Fly   567 VQEFLLFILGIQQVA-CTVDTLGNVHKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDARREEA 630
            |.:.:..:|.:|.|| ...:.|...::|:|:|:....|.|||:::.:....::..::::.|::||
Mouse   563 VVDLIRLVLAVQDVAQVNEENLPTYNRCALYALGAAYLNLISQLTTVPAFCQHIHEVIETRKKEA 627

  Fly   631 SHFLPP--LLEPKKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLNQTDHPGHR 693
            .:.||.  .:|..:|:.....:.:..| ..:..:.|.|..:|.::.||  ..||....||     
Mouse   628 PYMLPEDVFVEKPRLSQNLDGVVIEFL-FRQSKISEVLGGSGYNSDRL--CLPYIPQLTD----- 684

  Fly   694 HSWVESVSNQLTQRNSSADLTVYNGDVDSVSSSPGVCKKLLAPEFNFDAMKRALAEPTEAAKREQ 758
                   .::|::|.|..:......:|:| .:||...:::.|.|..::.:|:|:.: :.|.:.::
Mouse   685 -------EDRLSKRKSIGETISLQVEVES-RNSPEKEERVPAEEITYETLKKAIVD-SVAVEEQE 740

  Fly   759 RERQMQIVRTFREGEFDDLMRRTEPKHDLIQNRLNELFNSLAVERQITQSDTKSSQL-QASNEK- 821
            ||||.|:|..|::..|:::......:..|:|::||::| .:.:....:.|.|.|:.. |..|.. 
Mouse   741 RERQRQVVEKFQKAPFEEIAAHCGARASLLQSKLNQIF-EITIRPPPSPSGTISAAYGQPQNHSI 804

  Fly   822 PIYETNFPELFYY 834
            |:||..||:|..|
Mouse   805 PVYEMKFPDLCVY 817



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 550 1.000 Domainoid score I252
eggNOG 1 0.900 - - E1_KOG1877
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H66195
Inparanoid 1 1.050 550 1.000 Inparanoid score I1130
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56105
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0002866
OrthoInspector 1 1.000 - - otm42518
orthoMCL 1 0.900 - - OOG6_104012
Panther 1 1.100 - - O PTHR12444
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2505
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1413.860

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