DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and efr3ba

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_021323125.1 Gene:efr3ba / 560858 ZFINID:ZDB-GENE-030616-64 Length:844 Species:Danio rerio


Alignment Length:840 Identity:321/840 - (38%)
Similarity:484/840 - (57%) Gaps:69/840 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95
            ||||.|||||||||||||||.:|||||||:||||||||:||:|:||||||.||.::.::|:.|.|
Zfish    38 CGCCGALRPRYKRLVDNIFPEDPEDGLVKANMEKLTFYALSAPEKLDRIGAYLSERLSRDVARHR 102

  Fly    96 YKLAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTP 160
            |....|||||:|.||.|||.| ::||||||||.||:||||...|||:|:.||||||||||.|||.
Zfish   103 YGYVCIAMEALDQLLMACHCQ-SINLFVESFLTMVRKLLEADKPNLQILGTNSFVKFANIEEDTA 166

  Fly   161 SYHRRYDFFISKFSSMCHS--DAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVP 223
            ||||.||||:|:||.||||  :...:|..:|:|||:|||||:||||:|:|..|||:.:||:||||
Zfish   167 SYHRSYDFFVSRFSEMCHSSFEDPDIRTKIRMAGIRGLQGVVRKTVNDELQANIWDPQHMDKIVP 231

  Fly   224 SLLFNMQFCVNVMFVKKNLLASGDLTPVEDATNVTPPALAEEVLRELVGRASFGHIRSVLKPLLT 288
            |||||:|       .::.:..|.  :|..:....:|..|.|...|||:|||.:|:|::.:||:|.
Zfish   232 SLLFNLQ-------QEEGIERSP--SPETEKEKESPVELTERCFRELLGRAVYGNIKNAVKPVLM 287

  Fly   289 HLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTRTSLAVVLSKIIAI 353
            |||.|.||...|||:..|:|:|.|||.|:|:.|::.|:.|||.|.|:|.:.|..:..|:|:...|
Zfish   288 HLDNHSLWEGKTFAVRCFKIIMYSIQSQHSHLVIQQLLGHLDANSKNSARVRAGIVEVISEAAVI 352

  Fly   354 AAGESVGPSALDIINNLLTHLRTSVSTTSEIT----------------PEESQYQEALINALGEF 402
            .|..|:||:.|::.|.||..||.||.  .|:|                .||.|.||::|..:|.|
Zfish   353 EASGSIGPTVLEVFNTLLKQLRLSVD--YELTGSYDSFANMGTKVIKVHEERQLQESVIKTIGSF 415

  Fly   403 ANHHPDYQKIEIMLFIMNTVP---------DLSKKSKGDQMLQNILLKSLLKVGTQYSTVSFEKA 458
            ||..|.||:.|:||||:..:|         ..:...:|.:|:|.:||||||:|...:.:.:...|
Zfish   416 ANTLPTYQRSEVMLFIIGKIPVPGMYPALGSANTGVEGSRMIQIMLLKSLLQVTAGFQSNNILTA 480

  Fly   459 FPASFLQPLLKMARAPHNPTRMVVMQILQALLDRHQNE------QVLSSVSVKPYPALSQEPPSR 517
            .|.|||.|||..........|::|:.||.:::|||.|.      :::|.:|:.   .|..:..||
Zfish   481 LPTSFLDPLLSFTLMEDAEIRLLVLDILISIIDRHDNRHKFSPVRIISDISIL---KLKVDKCSR 542

  Fly   518 SDIIFTHKYGANIMQALIDSMALSDRVDALTSSFNT-AALLIVEMSCNETVQEFLLFILGIQQVA 581
            .|.:|..|:...:.:.:..:......|.....|.:| ..|:.||::..|.|.:.:...|.:|.:|
Zfish   543 QDNLFMKKHSHRLYRHIYLACKEDSSVQRHFESLHTLLGLICVELANEEVVVDLIRLALALQDLA 607

  Fly   582 CTVDTLGNVHKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDARREEASHFLPP--LLEPKKLA 644
            .|.|||....:|::||:|...|.|||:::.:....::..:::::|::.....||.  |:|..|:.
Zfish   608 LTDDTLPVYSRCAIHALSAAYLNLISQLTTVPTFCQHVHEVIESRKKLVPFLLPEDVLVESPKIP 672

  Fly   645 GKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLNQTDHPGHRHSWVESVSNQLTQRNS 709
            .|...:: ..:...:..:.|.|..:|.:.:||.|.....:...|....|.|..::||.||...: 
Zfish   673 EKLEKVE-GEMLFAQAKIAEMLGGSGYNTERLATAYIPQITDEDRLSKRKSIGDTVSLQLEMES- 735

  Fly   710 SADLTVYNGDVDSVSSSPGVCKKLLAPEFNFDAMKRALAEPTEAAKREQRERQMQIVRTFREGEF 774
                          .:||...::..|.:..|:.:|:|:.:.....:.| |||:.|:|..|:...|
Zfish   736 --------------RNSPEKEQRSTAEQITFETLKQAIVDSVNVEELE-RERRRQVVERFQTAPF 785

  Fly   775 DDLMRRTEPKHDLIQNRLNELFNSLAVERQITQSDTKSSQLQASNEKPIYETNFPELFYY 834
            :::......:..|:|::||::| .:.:....:.|.:..:....|...|:||..||:|..|
Zfish   786 EEIAAHCGARSSLLQSKLNQIF-EITIRPPPSPSGSVGNGHGRSRSVPVYEMKFPDLCVY 844



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 557 1.000 Domainoid score I238
eggNOG 1 0.900 - - E1_KOG1877
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H66195
Inparanoid 1 1.050 558 1.000 Inparanoid score I1069
OMA 1 1.010 - - QHG56105
OrthoDB 1 1.010 - - D173880at2759
OrthoFinder 1 1.000 - - FOG0002866
OrthoInspector 1 1.000 - - otm24507
orthoMCL 1 0.900 - - OOG6_104012
Panther 1 1.100 - - O PTHR12444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1413.840

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