DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and efr3a

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_021334938.1 Gene:efr3a / 393800 ZFINID:ZDB-GENE-040426-1681 Length:853 Species:Danio rerio


Alignment Length:886 Identity:314/886 - (35%)
Similarity:483/886 - (54%) Gaps:125/886 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95
            ||||..||||||||||||||.:|:||||||:|||||||::|:|:||||||.||.::.|:|:.|.|
Zfish    11 CGCCGPLRPRYKRLVDNIFPEDPKDGLVKSDMEKLTFYAVSAPEKLDRIGAYLAERLTRDVVRHR 75

  Fly    96 YKLAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTP 160
            |....|||||:|.||.|||:| ::..||||||.||.||||...|:|:::.||||||||||.||||
Zfish    76 YGYVGIAMEALDQLLMACHSQ-SIKPFVESFLHMVAKLLESREPDLQVLGTNSFVKFANIEEDTP 139

  Fly   161 SYHRRYDFFISKFSSMCHS--DAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVP 223
            |||||||||:|:||:||||  :....|..:|:|||||||||:||||:|:|...|||.:||:|::|
Zfish   140 SYHRRYDFFVSQFSAMCHSTHEDPETRSRIRVAGIKGLQGVVRKTVNDELQAIIWEPQHMDKLIP 204

  Fly   224 SLLFNMQFCVNVMFVKKNLLASGDLTPVEDATNVTPPALAEEVLRELVGRASFGHIRSVLKPLLT 288
            |:|||||                |....|.|....|.:|||...|||:|||::|::.:.::|:|.
Zfish   205 SMLFNMQ----------------DNEDSERAGEENPASLAESCFRELLGRAAYGNMNNAVRPVLV 253

  Fly   289 HLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTRTSLAVVLSKIIAI 353
            |||.|.||.||.||:..|||:|.|||.|:|:.|::.::.|||.:.|::|:.|..:..||.:.:||
Zfish   254 HLDNHRLWDPNDFAVSCFRIIMYSIQAQHSHHVIQQVLSHLDTHSKNTPRVRAGIVQVLLETVAI 318

  Fly   354 AAGESV-------------------------GPSALDIINNLLTHLRTSV-------------ST 380
            ||..|:                         ||:.|::.|.||.|||.||             |:
Zfish   319 AAKGSIGHIAHNQNNAYTFLSSVSSPPNLWLGPTVLEVFNTLLKHLRMSVDFELGDGSRRNSTSS 383

  Fly   381 TSEITPEESQ---YQEALINALGEFANHHPDYQKIEIMLFIMNTVP---------DLSK-KSKGD 432
            .|.:..:||:   .|.|:|..:|.|..:.||||:.|:|:|||..||         |..| ..:|.
Zfish   384 LSSVRTKESEERIVQNAIIQTIGFFGGNLPDYQRAEVMMFIMGKVPVYGTPCHTLDTVKIGHQGT 448

  Fly   433 QMLQNILLKSLLKVGTQYSTVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQILQALLDRHQNEQ 497
            :.:|.:||.||:.|.:.:...:.....||:||:||..::....:..|.:|::||..::|||.|..
Zfish   449 KRIQAMLLSSLIMVTSGFKCKTMGAGLPAAFLEPLCSISLMEDSELRQLVLEILHNIIDRHDNRA 513

  Fly   498 VLSSVSVKPYPA---LSQEPPSRSDIIFTHKYGANIMQALIDSMALSDRVDA-LTSSFNTAALLI 558
            .|..:.:.|..|   ..:|...:.|::|..|:|..:.:.:.......|.:.. ....|...||:.
Zfish   514 KLRGIRIIPNVAALKFKREKICKEDVVFMKKHGQQLYRHIYLGCKEEDNLQKNFELLFTALALIT 578

  Fly   559 VEMSCNETVQEFLLFILGIQQVA-CTVDTLGNVHKCSLHAISIGLLVLISRVSGINNLLEYAQKI 622
            :|::..|.|.:.:...:.:|.:| ...:.:....:|.:.|:....|..:|::.......::..|:
Zfish   579 IELANEEVVIDLMRLSIALQDMALVNEENMPMFIRCGIMALVAAYLNFLSQMIANPPFCQHVSKV 643

  Fly   623 VDARREEASHFLPP-LLEPKKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPY---- 682
            ::.|..:|.:.||. :...|.:...:.:.:...|......|.|.:...|.:.:||:  .||    
Zfish   644 IELRSLDAPYLLPEHIFREKCVLPDSLDREDNALYFQTADLAEAMTVPGYNVERLS--IPYIPQV 706

  Fly   683 -----------SLNQT--DHPGHRHSWVESVSNQLTQRNSSADLTVYNGDVDSVSSS-PGVCKKL 733
                       ...||  |....|.|:|:::|.|                ||.:|:| |.  :..
Zfish   707 TVLYTVGKILHRCKQTSRDRMPRRKSFVDTISLQ----------------VDIISNSVPD--QSQ 753

  Fly   734 LAPEFNFDAMKRALAEPTEAAKREQRERQMQIVRTFREGEFDDLMRRTEPKHDLIQNRLNELFNS 798
            ||.|..|:.:|:|:  .|...:.::|||:.|::..|::..|:::....|.|.:::.:||.::| .
Zfish   754 LAEEITFETLKKAI--DTTGLEEQERERRRQVMEKFQKAPFEEIAAHCESKANMLHDRLAQIF-E 815

  Fly   799 LAVERQITQSDTKS-----SQLQASNEKPIYETNFPELFYY 834
            |.:....:.|.|.:     :|.|:   .|:||..||:|..|
Zfish   816 LTIRPPPSPSGTVTVTSGHAQYQS---VPVYEMKFPDLCVY 853



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170586202
Domainoid 1 1.000 557 1.000 Domainoid score I238
eggNOG 1 0.900 - - E1_KOG1877
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 558 1.000 Inparanoid score I1069
OMA 1 1.010 - - QHG56105
OrthoDB 1 1.010 - - D173880at2759
OrthoFinder 1 1.000 - - FOG0002866
OrthoInspector 1 1.000 - - otm24507
orthoMCL 1 0.900 - - OOG6_104012
Panther 1 1.100 - - LDO PTHR12444
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1514.770

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