DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and EFR3B

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:NP_055786.1 Gene:EFR3B / 22979 HGNCID:29155 Length:817 Species:Homo sapiens


Alignment Length:857 Identity:333/857 - (38%)
Similarity:501/857 - (58%) Gaps:97/857 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 CGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDINRKR 95
            ||||.|||||||||||||||.:|||||||:||||||||:||:|:||||||.||.::..:|:.|.|
Human     5 CGCCGALRPRYKRLVDNIFPEDPEDGLVKTNMEKLTFYALSAPEKLDRIGAYLSERLIRDVGRHR 69

  Fly    96 YKLAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDTP 160
            |....|||||:|.||.|||.| ::||||||||:||.||||...|||:|:.||||||||||.||||
Human    70 YGYVCIAMEALDQLLMACHCQ-SINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDTP 133

  Fly   161 SYHRRYDFFISKFSSMCHS--DAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIVP 223
            ||||.||||:|:||.||||  |...::..:|::||||||||:||||:|:|..|||:.:||:||||
Human   134 SYHRSYDFFVSRFSEMCHSSHDDLEIKTKIRMSGIKGLQGVVRKTVNDELQANIWDPQHMDKIVP 198

  Fly   224 SLLFNMQFCVNVMFVKKNLLASGDLTPVEDATNVTP------------PA-LAEEVLRELVGRAS 275
            |||||:|.                   ||:|.:.:|            || |||..||||:|||:
Human   199 SLLFNLQH-------------------VEEAESRSPSPLQAPEKEKESPAELAERCLRELLGRAA 244

  Fly   276 FGHIRSVLKPLLTHLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTR 340
            ||:|::.:||:|.|||.|.||.|..|||..|:|:|.|||||:|:.|::.|:.|||.|.:|:...|
Human   245 FGNIKNAIKPVLIHLDNHSLWEPKVFAIRCFKIIMYSIQPQHSHLVIQQLLGHLDANSRSAATVR 309

  Fly   341 TSLAVVLSKIIAIAAGESVGPSALDIINNLLTHLRTS------------VSTTSEITP--EESQY 391
            ..:..|||:...|||..||||:.|::.|.||..||.|            ||..::|..  ||..:
Human   310 AGIVEVLSEAAVIAATGSVGPTVLEMFNTLLRQLRLSIDYALTGSYDGAVSLGTKIIKEHEERMF 374

  Fly   392 QEALINALGEFANHHPDYQKIEIMLFIMNTVP--------DLSKKSKG-DQMLQNILLKSLLKVG 447
            |||:|..:|.||:..|.||:.|::||||:.||        |..:..:. :::.|.:||||||:|.
Human   375 QEAVIKTVGSFASTLPTYQRSEVILFIMSKVPRPSLHQAVDTGRTGENRNRLTQIMLLKSLLQVS 439

  Fly   448 TQYSTVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQILQALLDRHQNE------QVLSSVSVKP 506
            |.:...:...|.|::||..||..|.......|:.|::||.:.:|||.|.      ..||.:||. 
Human   440 TGFQCNNMMSALPSNFLDRLLSTALMEDAEIRLFVLEILISFIDRHGNRHKFSTISTLSDISVL- 503

  Fly   507 YPALSQEPPSRSDIIFTHKYGANIMQALI----DSMALSDRVDALTSSFNTAALLIVEMSCNETV 567
              .|..:..||.|.:|..|:...:.:.:.    :...:....:||   :...||:.:|::..|.|
Human   504 --KLKVDKCSRQDTVFMKKHSQQLYRHIYLSCKEETNVQKHYEAL---YGLLALISIELANEEVV 563

  Fly   568 QEFLLFILGIQQVA-CTVDTLGNVHKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDARREEAS 631
            .:.:..:|.:|.|| ...:.|...::|:|:|:....|.|||:::.:....::..::::.|::||.
Human   564 VDLIRLVLAVQDVAQVNEENLPVYNRCALYALGAAYLNLISQLTTVPAFCQHIHEVIETRKKEAP 628

  Fly   632 HFLPP--LLEPKKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLNQTDHPGHRH 694
            :.||.  .:|..:|:.....:.: .|...:..:.|.|..:|.::.||  ..||....||      
Human   629 YMLPEDVFVERPRLSQNLDGVVI-ELLFRQSKISEVLGGSGYNSDRL--CLPYIPQLTD------ 684

  Fly   695 SWVESVSNQLTQRNSSADLTVYNGDVDSVSSSPGVCKKLLAPEFNFDAMKRALAEPTEAAKREQR 759
                  .::|::|.|..:......:|:| .:||...:::.|.|..::.:|:|:.: :.|.:.::|
Human   685 ------EDRLSKRRSIGETISLQVEVES-RNSPEKEERVPAEEITYETLKKAIVD-SVAVEEQER 741

  Fly   760 ERQMQIVRTFREGEFDDLMRRTEPKHDLIQNRLNELFNSLAVERQITQSDTKSSQL-QASNEK-P 822
            ||:.|:|..|::..|:::......:..|:|::||::| .:.:....:.|.|.::.. |..|.. |
Human   742 ERRRQVVEKFQKAPFEEIAAHCGARASLLQSKLNQIF-EITIRPPPSPSGTITAAYGQPQNHSIP 805

  Fly   823 IYETNFPELFYY 834
            :||..||:|..|
Human   806 VYEMKFPDLCVY 817



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 548 1.000 Domainoid score I255
eggNOG 1 0.900 - - E1_KOG1877
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H66195
Inparanoid 1 1.050 549 1.000 Inparanoid score I1148
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG56105
OrthoDB 1 1.010 - - D173880at2759
OrthoFinder 1 1.000 - - FOG0002866
OrthoInspector 1 1.000 - - otm40439
orthoMCL 1 0.900 - - OOG6_104012
Panther 1 1.100 - - O PTHR12444
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R2505
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1514.870

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