DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and efr3b

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_031758961.1 Gene:efr3b / 100491752 XenbaseID:XB-GENE-6033491 Length:817 Species:Xenopus tropicalis


Alignment Length:840 Identity:333/840 - (39%)
Similarity:497/840 - (59%) Gaps:62/840 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 CCGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDINRK 94
            || ||.|||||||||||||||.:.||||||:||||||||:||:|:||||||.||.::.::|:.|.
 Frog     5 CC-CCGALRPRYKRLVDNIFPEDSEDGLVKANMEKLTFYALSAPEKLDRIGSYLSERLSRDVARH 68

  Fly    95 RYKLAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSNPNLKIMATNSFVKFANINEDT 159
            ||....|||||:|.||.|||.| ::||||||||:||.||||...|||:|:.||||||||||.|||
 Frog    69 RYGYVCIAMEALDQLLMACHCQ-SINLFVESFLKMVAKLLESEKPNLQILGTNSFVKFANIEEDT 132

  Fly   160 PSYHRRYDFFISKFSSMCHS--DAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHMEKIV 222
            |||||.||||:|:||.||||  |...:|..:|:|||||||||:||||:|:|..||||.:||:|||
 Frog   133 PSYHRSYDFFVSRFSEMCHSSHDDGEIRTKIRMAGIKGLQGVVRKTVNDELQANIWETQHMDKIV 197

  Fly   223 PSLLFNMQFCVNVMFVKKNLLASGDLTPVEDATNVTPPALAEEVLRELVGRASFGHIRSVLKPLL 287
            ||||:|:|      .|::....|.......:.....|..|||..||||:|||::|:|::.:||:|
 Frog   198 PSLLYNLQ------QVEETESRSPSPLQTSEKEKEIPAELAERCLRELLGRAAYGNIKNAIKPVL 256

  Fly   288 THLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKSSPKTRTSLAVVLSKIIA 352
            .|||.|.||.|..|||..|:|:|.|||||:|:.|::.|:.|||.|.||:...|..:..|||:...
 Frog   257 MHLDNHSLWEPKLFAIRCFKIIMYSIQPQHSHLVIQQLLGHLDANSKSAATVRAGIVEVLSEAAV 321

  Fly   353 IAAGESVGPSALDIINNLLTHLRTSV---------STTSEITP-----EESQYQEALINALGEFA 403
            |||..||||:.|::.|.||..||.|:         ||.:..|.     ||..:|||:|..:|.||
 Frog   322 IAASGSVGPTVLEVFNTLLRQLRLSIDYELTGTYDSTVNIGTKIIKEHEERMFQEAVIKTIGSFA 386

  Fly   404 NHHPDYQKIEIMLFIMNTVP--------DLSKKSKG-DQMLQNILLKSLLKVGTQYSTVSFEKAF 459
            :..|.||:.|:|||||..||        |..|..:. :::.|.:||||||:|...:...:...|.
 Frog   387 STLPIYQRSEVMLFIMGKVPLPSMHHAMDFGKAGENRNRLTQIMLLKSLLQVSMGFQCNNMLTAL 451

  Fly   460 PASFLQPLLKMARAPHNPTRMVVMQILQALLDRHQNEQVLSSVSVKP---YPALSQEPPSRSDII 521
            |:|||.|||..|.......|:.|::||..|:|||.|...:||:|.:|   ...|..:..||.|.:
 Frog   452 PSSFLDPLLSSALMEDAEIRLFVLEILICLIDRHGNRHKISSISTEPDISVLKLKVDKCSRQDTL 516

  Fly   522 FTHKYGANIMQALIDSMALSDRVDALT---SSFNTAALLIVEMSCNETVQEFLLFILGIQQVAC- 582
            |..|:..::.:.:.  ::.::..:..|   :.:....::.:|::..:.|.:.:..:|.:|::|. 
 Frog   517 FMKKHAQHLYRHIY--LSCNEPTNVQTHYEALYFLLVIISIELATEDVVVDLIRLVLAVQEMALN 579

  Fly   583 TVDTLGNVHKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDARREEASHFLP-PLLEPKKLAGK 646
            ..|.|....:|::.|:....|.|||.::.:....::..::::.|::||.:.|| .:...|.....
 Frog   580 NEDNLPAYCRCAIQALCAAYLSLISNLTTVPAFCQHVHEVIEMRQKEAPYLLPEDIFTEKPQWSS 644

  Fly   647 TFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLNQTDHPGHRHSWVESVSNQLTQRNSSA 711
            :.:.....|...:..:.|.|..:|.:..||:|  ||....||            .::|::|.|..
 Frog   645 SMDRVETQLLFLQSKISEVLGGSGYNTDRLST--PYVPQLTD------------EDRLSKRKSIG 695

  Fly   712 DLTVYNGDVDSVSSSPGVCKKLLAPEFNFDAMKRALAEPTEAAKREQRERQMQIVRTFREGEFDD 776
            :......:|:| .:||...:|..|.|..|:.:|:|:.: :.|.:.::|||:.|:|..|::..|::
 Frog   696 ETISLQVEVES-RNSPEKEEKAPAEEITFETLKKAIVD-SVAVEEQERERRRQVVEKFQKAPFEE 758

  Fly   777 LMRRTEPKHDLIQNRLNELFNSLAVERQITQSDTKSSQL-QASNEK-PIYETNFPELFYY 834
            :......:..|:|::||::| .|.:....:.|.|.::.. |:.|.. |:||..||:|..|
 Frog   759 IAAHCGARATLLQSKLNQIF-ELTIRPPPSPSGTITAAYGQSQNHSIPVYEMKFPDLCVY 817



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 555 1.000 Domainoid score I241
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H66195
Inparanoid 1 1.050 557 1.000 Inparanoid score I1094
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173880at2759
OrthoFinder 1 1.000 - - FOG0002866
OrthoInspector 1 1.000 - - otm47620
Panther 1 1.100 - - O PTHR12444
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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