DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment stmA and efr3a

DIOPT Version :9

Sequence 1:NP_001014513.1 Gene:stmA / 35865 FlyBaseID:FBgn0086784 Length:834 Species:Drosophila melanogaster
Sequence 2:XP_031759388.1 Gene:efr3a / 100216089 XenbaseID:XB-GENE-493102 Length:819 Species:Xenopus tropicalis


Alignment Length:869 Identity:322/869 - (37%)
Similarity:489/869 - (56%) Gaps:112/869 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 PSCCCGCCSALRPRYKRLVDNIFPVNPEDGLVKSNMEKLTFYSLSSPDKLDRIGEYLYQKATKDI 91
            |:..||||.|||||||||||||||.:|.|||||::|||||||::|:|:||||||.||.::.::|:
 Frog     2 PAGICGCCGALRPRYKRLVDNIFPEDPRDGLVKADMEKLTFYAVSAPEKLDRIGAYLAERLSRDV 66

  Fly    92 NRKRYKLAEIAMEAMDLLLQACHAQTTLNLFVESFLRMVQKLLEDSNPNLKIMATNSFVKFANIN 156
            .|.||....|||||:|.||.|||:| ::..||||||.||.||||...|.|:|..||||||||||.
 Frog    67 MRHRYGNVFIAMEALDQLLMACHSQ-SIKPFVESFLHMVAKLLESGEPKLQIYGTNSFVKFANIE 130

  Fly   157 EDTPSYHRRYDFFISKFSSMCHS--DAASMRDSLRLAGIKGLQGVIRKTVSDDLVENIWEAEHME 219
            |||||||||||||:|:||:||||  :...:|..:|:|||:|:|||:||||:|:|...|||.:||:
 Frog   131 EDTPSYHRRYDFFVSRFSAMCHSCHNDPEVRKEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMD 195

  Fly   220 KIVPSLLFNMQFCVNVMFVKKNLLASGDLTPVEDA-TNVTPPA-------------LAEEVLREL 270
            |||||||||||                   .:||. :.:.|||             |||...|||
 Frog   196 KIVPSLLFNMQ-------------------KIEDTDSRIGPPASPTAGDKEENPSILAENCFREL 241

  Fly   271 VGRASFGHIRSVLKPLLTHLDRHELWVPNTFAIHTFRIVMISIQPQYSYTVVETLMQHLDNNFKS 335
            :|||::|::.:.::|:..|||.|:||..|.||:..|:|:|.|||.|||:.|::.::.|||.:.|.
 Frog   242 LGRAAYGNMNNAVRPVFAHLDHHKLWESNEFAVSCFKIIMYSIQAQYSHHVIQQILLHLDLHKKD 306

  Fly   336 SPKTRTSLAVVLSKIIAIAAGESVGPSALDIINNLLTHLRTSV----------------STTSEI 384
            ||:.|..:..||.:.:||||..|:||:.|::.|.||.||..||                |::|..
 Frog   307 SPRIRAGIVQVLLEAVAIAAKGSIGPTVLEVFNTLLKHLTLSVDFELGDRRSSAGSAVFSSSSAK 371

  Fly   385 TPEESQYQEALINALGEFANHHPDYQKIEIMLFIMNTVP---------DLSK-KSKGDQMLQNIL 439
            ..:|...|.|:|..:|.|.::.||||:.|||:|||..||         |.|: ...|.:.:|.:|
 Frog   372 ESDERIVQNAIIQTIGFFGSNLPDYQRSEIMMFIMGKVPVFGSSPHMLDTSQLGDMGTKRIQIML 436

  Fly   440 LKSLLKVGTQYSTVSFEKAFPASFLQPLLKMARAPHNPTRMVVMQILQALLDRHQNEQVLSSVSV 504
            |:|||.|.:.|...:...|.|.:||.|||..:.......|.:|::||..|:|||.|...|..:.:
 Frog   437 LRSLLMVTSGYKAKTIAAALPPAFLDPLLSPSLMEDCELRQLVLEILHNLIDRHDNRAKLRGIRI 501

  Fly   505 KPYPA---LSQEPPSRSDIIFTHKYGANIMQALIDSMALSDRV----DALTSSFNTAALLIVEMS 562
            .|..|   :.:|..||.|:.|..|:|..:.:.:.......|.|    :.|   :.|.|||.:|::
 Frog   502 IPDVADLKIKREKISRQDVNFMKKHGQQLYRHIYLGCKEDDNVHKNYELL---YTTLALLTIELA 563

  Fly   563 CNETVQEFLLFILGIQQVACT-VDTLGNVHKCSLHAISIGLLVLISRVSGINNLLEYAQKIVDAR 626
            ..|.|.:.:...:.:|.:|.| .|.|...::|.:.|:....|..:|::..:....::..|:::.|
 Frog   564 NEEVVIDLIRVAIALQDIAITNEDNLQMFNRCGIMAMVAAYLNFLSQMIAVPAFCQHVSKVIETR 628

  Fly   627 REEASHFLPPLL------EPKKLAGKTFNLQLPHLAIDKLALGECLQNAGMDAQRLNTGAPYSLN 685
            ..:|::|||.::      .||.|.....||   ....:|:|  |.|..:|...:||:  .||...
 Frog   629 NMDAAYFLPEVIFRDKYSLPKSLEKHEKNL---IFLTNKIA--ESLGGSGYSVERLS--IPYVPQ 686

  Fly   686 QTDHPGHRHSWVESVSNQLTQRNSSADLTVYNGDVDSVSSSPGVCKKLLAPEFNFDAMKRALAEP 750
            .||            .::|::|.|..|......|:.|.:::.   .|:...|..|:::|:|:  .
 Frog   687 VTD------------EDRLSRRKSIVDTISIQVDILSGTNTE---DKVNTEEITFESLKKAI--D 734

  Fly   751 TEAAKREQRERQMQIVRTFREGEFDDLMRRTEPKHDLIQNRLNELFNSLAVERQITQSDTKS--- 812
            ....:.:::|::..::..|::..|:::..:.|.|.:|:.::|.::. .|.:....:.|.|.:   
 Frog   735 NTGMEEQEKEKRRLVIEKFQKAPFEEIAAQCESKANLLHDKLAQIL-ELTIRPPPSPSGTLTMTA 798

  Fly   813 --SQLQASNEKPIYETNFPELFYY 834
              :|.|:   .|:||..||:|..|
 Frog   799 GHAQYQS---VPVYEMKFPDLCVY 819



Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 555 1.000 Domainoid score I241
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 557 1.000 Inparanoid score I1094
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D173880at2759
OrthoFinder 1 1.000 - - FOG0002866
OrthoInspector 1 1.000 - - otm47620
Panther 1 1.100 - - LDO PTHR12444
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1122
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
88.160

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