DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment gcl and GMCL2

DIOPT Version :9

Sequence 1:NP_724708.1 Gene:gcl / 35864 FlyBaseID:FBgn0005695 Length:569 Species:Drosophila melanogaster
Sequence 2:NP_001344937.1 Gene:GMCL2 / 64396 HGNCID:19717 Length:526 Species:Homo sapiens


Alignment Length:487 Identity:169/487 - (34%)
Similarity:263/487 - (54%) Gaps:43/487 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 KRKRSTDSSLGKD------------DPAQLDTTQPKKKKLLTTTQYIYKALFKEEKNSDVAVMAL 73
            |||||:.:....|            |..|.....|.:|||.:|::|||:.||...:|||:.:.||
Human    51 KRKRSSGACRYCDPDSHREEHEEEGDKQQPLLNTPARKKLRSTSKYIYQTLFLNGENSDIKICAL 115

  Fly    74 DKVWHLHKVYLSQSPYFYTMFNGTWREAQQNFIQITILDDRITVASLDAVFGSMYSDEIEIESAD 138
            .:.|.|||:||.||.||.:||:|:|:|:..|.|::.|.|..|.|.:|...|||:|.|::.|:.:.
Human   116 GEEWRLHKIYLCQSGYFSSMFSGSWKESSMNIIELEIPDQNIDVDALQVAFGSLYRDDVLIKPSR 180

  Fly   139 VISVLATATLFHLDGIIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQWFQINLLSIYS 203
            |:::||.|.:..|||:|.:|.|.|.:.|:.:|...||.:...||:..|||...:|...||::  .
Human   181 VVAILAAACMLQLDGLIQQCGETMKETINVKTVCGYYTSVEIYGLDSVKKKCLEWLLNNLMT--H 243

  Fly   204 KQPNLLRHISIELMSALTASPDLYVMQTEFSLYTLLRTWMFLRLHPDYDPEDPVQRAEALKTQEL 268
            :...|.:.:.|.:|..|..|.:|:|||.|..:||.|:.||||:|.|.::        .:||  :|
Human   244 QNVKLFKELGINVMKQLIGSSNLFVMQVEMDVYTTLKKWMFLQLVPSWN--------GSLK--QL 298

  Fly   269 LVNAGVETHAPSGDVVQWTYFTSRS---EERSFLATPEGQPYVKVFQKLRTQYLTNHYMDLKIIY 330
            |....|             :|:.:.   |..:||.|..|:|:|.||:.||.||:.:.....:||.
Human   299 LTETDV-------------WFSKQRKDFEGMAFLETEPGKPFVSVFRHLRLQYIISDLASARIIE 350

  Fly   331 NDNIIPKEWLYRHIHNHWDALLRIDHGQEDCSPQQLDDEQFFENCMRCGRMLLEPGYQKWRWTGF 395
            .|.|:|.|||.......|.|:||.:..:| ..||:::.|....|.|||||.|.:.|...|.||||
Human   351 QDGIVPSEWLSSVYKQQWFAMLRAEQDRE-VGPQEINKEDLEGNSMRCGRKLAKDGEYYWCWTGF 414

  Fly   396 NFGMDLILIMDSRRLNIRRHHRHE-HERVLSLQTKRKFMVRTTVTSINAQRQAVFTQTSEICSLS 459
            |||.||::|..:..:..:|:..:: ....:||:.:|....|..:.|.::..:.|.::|:....|.
Human   415 NFGFDLLVIYTNGYIIFKRNTLNQPRSGSVSLRPRRSIAFRLRLASFDSSGKLVCSRTTGYQILI 479

  Fly   460 LEKNEEVPLMVLDPK-LVHPLLISINMLVVMP 490
            |:|::|..:|.||.: |..||.|..|.|.:.|
Human   480 LKKDQEQVVMNLDSRFLTFPLYICCNFLYISP 511

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gclNP_724708.1 BTB 56..163 CDD:279045 46/106 (43%)
BTB 67..166 CDD:197585 42/98 (43%)
GMCL2NP_001344937.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..85 8/33 (24%)
Nuclear localization signal. /evidence=ECO:0000255 49..55 3/3 (100%)
Nuclear localization signal. /evidence=ECO:0000255 85..91 3/5 (60%)
BTB 98..208 CDD:306997 47/109 (43%)
BACK 213..>283 CDD:197943 23/71 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165142982
Domainoid 1 1.000 165 1.000 Domainoid score I3919
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 302 1.000 Inparanoid score I2680
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG48664
OrthoDB 1 1.010 - - D1111791at2759
OrthoFinder 1 1.000 - - FOG0000347
OrthoInspector 1 1.000 - - otm41524
orthoMCL 1 0.900 - - OOG6_106864
Panther 1 1.100 - - O PTHR23231
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X249
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
1211.910

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