DRSC/TRiP Functional Genomics Resources

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Protein Alignment gcl and btbd16

DIOPT Version :9

Sequence 1:NP_724708.1 Gene:gcl / 35864 FlyBaseID:FBgn0005695 Length:569 Species:Drosophila melanogaster
Sequence 2:XP_009304806.1 Gene:btbd16 / 565632 ZFINID:ZDB-GENE-100513-3 Length:577 Species:Danio rerio


Alignment Length:448 Identity:92/448 - (20%)
Similarity:164/448 - (36%) Gaps:121/448 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 IVGSMHMNVAEVFSNRRKRKRSTDSSLGKDDPAQL----DTTQ---------------PKKKKLL 49
            ::|...:..||.|:|     :|.:..:...||..|    |.|.               .::.:|.
Zfish    61 LLGQAQIQRAEEFAN-----KSPERKIKSADPMALHWHEDATSCPQSPLPRLVHPLSASRRTRLC 120

  Fly    50 TTTQYIYKALFKEEK------------NSDVAVMALDKVWHLHKVYLSQSPYFYTMFNGT----- 97
            ....:..|....||:            |.|..:..|...|.||...||.|.....::..:     
Zfish   121 KDVTWSSKLHTPEERFHVLSRKVTNNSNPDAVLECLGVRWELHCAVLSSSDTLCELYTSSKRQRD 185

  Fly    98 --------------------------WREAQQNFIQITILDDRITVASLDAVFGSMYSDEIEIES 136
                                      |..:....:::.:.|..|...:|......:|..|   |.
Zfish   186 VQLHERAVKASRASSSAHGKGLVYRNWHLSGLLILRLPVKDASINKEALSFALRILYDPE---ER 247

  Fly   137 ADV--ISVLATATLFHLDGIIDKCAEVMVDNISPETAIQYYEAACQYGVVGVKKSTFQW---FQI 196
            .|.  .:||:.|.|..:..:..||.:.|:.:||......:::|:|::....::::..:|   |.:
Zfish   248 PDEWGEAVLSAAALLGMSNLFQKCLKKMMADISSSNVCSFHQASCKFKETFLQRACERWLELFFV 312

  Fly   197 NLLSIYSKQPNLLRHISIELMSALTASPDLYVMQTEFSLYTLLRTWMFLRLHPDYDPEDPVQRAE 261
            ..||.:.|    |:.:..:|:.....||.|:. ..|:.:..::..|::|:|:|            
Zfish   313 TELSSHIK----LKDLPFDLLLKTLRSPRLFA-PNEYEVLRVVLYWLYLQLNP------------ 360

  Fly   262 ALKTQELLVNAGVETHAPSGDVVQWTYFTSRSEERSFLATPEGQPYVKVFQKLRTQYLT--NHYM 324
             |:          :|......|:  |:|:  .|...||..|:||.|:..||.||...:|  .|..
Zfish   361 -LR----------QTPPAHSTVI--TFFS--RETTVFLELPQGQKYITAFQALRMHGITEWQHLQ 410

  Fly   325 DLKIIYNDNIIPKEWLYRHIHNHWDALLRIDHGQEDCSPQQLDDEQFFENCMRCGRML 382
            :||   |..::|:.||...:.||:..|.         |...:....|.:..||.|.||
Zfish   411 ELK---NIRVLPESWLLNILSNHYHTLY---------SGGDMIVTDFSKQAMRFGMML 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
gclNP_724708.1 BTB 56..163 CDD:279045 26/151 (17%)
BTB 67..166 CDD:197585 23/131 (18%)
btbd16XP_009304806.1 BACK 284..366 CDD:197943 19/109 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170575833
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4682
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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