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Protein Alignment PGRP-SC2 and Pglyrp1
DIOPT Version :9
Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445825.1 |
Gene: | Pglyrp1 / 84387 |
RGDID: | 621429 |
Length: | 183 |
Species: | Rattus norvegicus |
Alignment Length: | 173 |
Identity: | 71/173 - (41%) |
Similarity: | 101/173 - (58%) |
Gaps: | 6/173 - (3%) |
- Green bases have known domain annotations that are detailed below.
Fly 17 AVLGVT-----IISKSEWGGRSATSKTSLANYLSYAVIHHTAGNYCSTKAACITQLQNIQAYHMD 76
|:||:. ::.:|||....:.....|...:.|.||.||||::||:..:|..|.:|:|.|.|.
Rat 10 ALLGLADSCCFVVPRSEWKALPSECSKGLKKPVRYVVISHTAGSFCSSPDSCEQQARNVQLYQMK 74
Fly 77 SLGWADIGYNFLIGGDGNVYEGRGWNVMGAH-ATNWNSKSIGISFLGNYNTNTLTSAQITAAKGL 140
.|||.|:.||||||.||:|||||||.:.|.| ...||..||||:|:|:|:........:.||..|
Rat 75 QLGWCDVAYNFLIGEDGHVYEGRGWTIKGDHTGPIWNPMSIGITFMGDYSHRVPAKRALRAALNL 139
Fly 141 LSDAVSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNWK 183
|...||.|.:.|.|.:.|||.|.||..||..::..|::|.:::
Rat 140 LKCGVSEGFLRSNYEVKGHRDVQSTLSPGDQLYEIIQSWDHYR 182
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
61/146 (42%) |
Pglyrp1 | NP_445825.1 |
PGRP |
21..161 |
CDD:128941 |
61/139 (44%) |
Information from Original Tools:
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