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Protein Alignment PGRP-SC2 and pglyrp6
DIOPT Version :9
| Sequence 1: | NP_610410.1 |
Gene: | PGRP-SC2 / 35862 |
FlyBaseID: | FBgn0043575 |
Length: | 184 |
Species: | Drosophila melanogaster |
| Sequence 2: | NP_001038687.2 |
Gene: | pglyrp6 / 571817 |
ZFINID: | ZDB-GENE-071227-2 |
Length: | 498 |
Species: | Danio rerio |
| Alignment Length: | 170 |
Identity: | 71/170 - (41%) |
| Similarity: | 103/170 - (60%) |
Gaps: | 12/170 - (7%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 23 IISKSEWGGRSATSKTSLANYLS----YAVIHHT--AGNYCSTKAACITQLQNIQAYHMDSLGWA 81
||::|:|| |.|.....:||| |..|||| ....|:|...|..:::::|.||..|.||:
Zfish 330 IITRSQWG---AASYIGSPSYLSLPVRYLFIHHTYQPSKPCTTFEQCAAEMRSMQRYHQQSNGWS 391
Fly 82 DIGYNFLIGGDGNVYEGRGWNVMGAHATNWNSKSIGISFLGNYNTNTL--TSAQITAAKGLLSDA 144
||||:|:.|.|||:|||||||.:|||...:||...|:.|:|:| |:|| :||...........|
Zfish 392 DIGYSFVAGSDGNLYEGRGWNWVGAHTYGYNSIGYGVCFIGDY-TSTLPASSAMNMVRYDFTYCA 455
Fly 145 VSRGQIVSGYILYGHRQVGSTECPGTNIWNEIRTWSNWKA 184
.:.|::...|.||||||..:|||||..::.:|:||..:::
Zfish 456 TNGGRLSKSYSLYGHRQAAATECPGNTLYRQIQTWERYQS 495
|
Known Domains:
Indicated by green bases in alignment.
| Gene | Sequence | Domain | Region |
External ID | Identity |
| PGRP-SC2 | NP_610410.1 |
PGRP |
21..162 |
CDD:128941 |
62/146 (42%) |
| pglyrp6 | NP_001038687.2 |
PGRP |
328..472 |
CDD:128941 |
61/145 (42%) |
Information from Original Tools:
| Tool |
Simple Score |
Weighted Score |
Original Tool Information |
| BLAST Result |
Score |
Score Type |
Cluster ID |
| Compara |
1 |
0.930 |
- |
- |
|
C170586838 |
| Domainoid |
1 |
1.000 |
129 |
1.000 |
Domainoid score |
I5198 |
| eggNOG |
0 | 0.000 |
Not matched by this tool. |
| Hieranoid |
0 | 0.000 |
Not matched by this tool. |
| Homologene |
0 | 0.000 |
Not matched by this tool. |
| Inparanoid |
0 | 0.000 |
Not matched by this tool. |
| OMA |
0 | 0.000 |
Not matched by this tool. |
| OrthoDB |
1 |
1.010 |
- |
- |
|
D1110472at2759 |
| OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0000842 |
| OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
| orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101717 |
| Panther |
0 | 0.000 |
Not matched by this tool. |
| Phylome |
1 |
0.910 |
- |
- |
|
|
| RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4719 |
| SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
| SwiftOrtho |
1 |
1.000 |
- |
- |
|
|
| TreeFam |
0 | 0.000 |
Not matched by this tool. |
| ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
8 | 7.780 |
|
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